RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 BAG2O95816 211 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 TYMPP19971 482 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 RPA3P35244 121 aaPredicted RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 MPP3Q13368 585 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 E2F5Q15329 346 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 OASLQ15646 514 aaKnown RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 SLC39A12Q504Y0 691 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 RYBPQ8N488 228 aaPredicted RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ATXN7L3BQ96GX2 97 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 PWWP2AQ96N64 755 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 RPRD1AQ96P16 312 aaPredicted RBP7.54□□□□□ -1.2
NPHP3-208ENST00000490993 DPEP3Q9H4B8 488 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ENTPD7Q9NQZ7 604 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 ZNF180Q9UJW8 692 aa7.54□□□□□ -1.2
NPHP3-208ENST00000490993 MAP3K7O43318 606 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 HSPA8P11142 646 aaKnown RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 TUBP50607 506 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 FBXW10Q5XX13 1052 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 IL31Q6EBC2 164 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 LRRC8BQ6P9F7 803 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ARCQ7LC44 396 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 SETD3Q86TU7 594 aaPredicted RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 LONP2Q86WA8 852 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 CCNYL1Q8N7R7 359 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 CXorf38Q8TB03 319 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 USP13Q92995 863 aaPredicted RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 LPPQ93052 612 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 RMDN1Q96DB5 314 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 SLC39A10Q9ULF5 831 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 FZD10Q9ULW2 581 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 RGPD3A6NKT7 1758 aaPredicted RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 RGPD4Q7Z3J3 1758 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 PIRO00625 290 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 HMBSP08397 361 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 OGDHQ02218 1023 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 EFEMP1Q12805 493 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ITGA7Q13683 1181 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 RASA2Q15283 850 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ICE2Q659A1 982 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 CYB5D1Q6P9G0 228 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 TRIM67Q6ZTA4 783 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 TTC30AQ86WT1 665 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 UBR7Q8N806 425 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 SLC44A1Q8WWI5 657 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 CMTM5Q96DZ9 223 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 TBL1YQ9BQ87 522 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 SAR1AQ9NR31 198 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 EIF2B3Q9NR50 452 aaKnown RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 GTSE1Q9NYZ3 720 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 PADI3Q9ULW8 664 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 DOCK1Q14185 1865 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 TCRBV9S1A1TA0A576 114 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 OR6C75A6NL08 312 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 SLCO1B7G3V0H7 640 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 CLDN5O00501 218 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 CD48P09326 243 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 IL1R2P27930 398 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 SLC18A1P54219 525 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 PURAQ00577 322 aaKnown RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 DBN1Q16643 649 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 FAM83EQ2M2I3 478 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 OLFML1Q6UWY5 402 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 FAM43BQ6ZT52 329 aaPredicted RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 CCDC33Q8N5R6 958 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 FICDQ9BVA6 458 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 PRDM12Q9H4Q4 367 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 GOLGA2P5Q9HBQ8 144 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 IARS2Q9NSE4 1012 aaKnown RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 RNF19AQ9NV58 838 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 THAP1Q9NVV9 213 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 RBM22Q9NW64 420 aaKnown RBP eCLIP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 HEY2Q9UBP5 337 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ANGPTL3Q9Y5C1 460 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 GREB1LQ9C091 1923 aaPredicted RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 SLC12A8A0AV02 714 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ARL5CA6NH57 179 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 TMEM88BA6NKF7 163 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 BIRC5O15392 142 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 PMPCBO75439 489 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 UBOX5O94941 541 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 EOMESO95936 686 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ERCC2P18074 760 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 PSMB4P28070 264 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ECHS1P30084 290 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 PGM1P36871 562 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 PCSK7Q16549 785 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 MARC1Q5VT66 337 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 FAM171A1Q5VUB5 890 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 KCNMB4Q86W47 210 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 RASAL3Q86YV0 1011 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ARID3BQ8IVW6 561 aaPredicted RBP7.53□□□□□ -1.2
NPHP3-208ENST00000490993 EFHBQ8N7U6 833 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ADAM32Q8TC27 787 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 NTAN1Q96AB6 310 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 FAR2Q96K12 515 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 CCDC134Q9H6E4 229 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 AAASQ9NRG9 546 aa7.53□□□□□ -1.2
NPHP3-208ENST00000490993 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.52□□□□□ -1.2
NPHP3-208ENST00000490993 MOXD2PA6NHM9 499 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms