RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 TICRRQ7Z2Z1 1910 aa16.37■□□□□ 0.21
TRA2A-208ENST00000490942 A0A1B0GVM2 712 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 TCAF2A6NFQ2 919 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 TMEM221A6NGB7 291 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 NEDD8-MDP1E9PL57 170 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 M0R296 226 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 NCAM2O15394 837 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 HOXD9P28356 352 aaPredicted RBP16.36■□□□□ 0.21
TRA2A-208ENST00000490942 OPRD1P41143 372 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 MAGEA9P43362 315 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 OXCT1P55809 520 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 E2F5Q15329 346 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 IFI16Q16666 785 aaKnown RBP16.36■□□□□ 0.21
TRA2A-208ENST00000490942 HADHQ16836 314 aaKnown RBP16.36■□□□□ 0.21
TRA2A-208ENST00000490942 FBXO43Q4G163 708 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 TMEM196Q5HYL7 178 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 RAP1GAP2Q684P5 730 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 FBXL22Q6P050 247 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 SCYL2Q6P3W7 929 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 CHST9Q7L1S5 443 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 KIAA1328Q86T90 577 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 ZNF683Q8IZ20 524 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 CCDC185Q8N715 623 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 ACRBPQ8NEB7 543 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 TEKT4Q8WW24 435 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 PRICKLE1Q96MT3 831 aaPredicted RBP16.36■□□□□ 0.21
TRA2A-208ENST00000490942 PPP1R9BQ96SB3 815 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 PNKPQ96T60 521 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 IER2Q9BTL4 223 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 TSGA10Q9BZW7 698 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 DEC1Q9P2X7 70 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 FZD10Q9ULW2 581 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 USP18Q9UMW8 372 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 ADGRG1Q9Y653 693 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 TECTAO75443 2155 aa16.36■□□□□ 0.21
TRA2A-208ENST00000490942 CUL9Q8IWT3 2517 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 GOLGA6L7A0A1B0GV03 622 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 TULP3O75386 442 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 CLDN11O75508 207 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 CCDC175P0C221 793 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 GRIA2P42262 883 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 SOX9P48436 509 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 CLCN5P51795 746 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 GRSF1Q12849 480 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRA2A-208ENST00000490942 DGKKQ5KSL6 1271 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 ERMARDQ5T6L9 678 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 IER5LQ5T953 404 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 MANEALQ5VSG8 457 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 LRRC38Q5VT99 294 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 C11orf63Q6NUN7 778 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 RFWD3Q6PCD5 774 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 POLNQ7Z5Q5 900 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 CCDC117Q8IWD4 279 aaPredicted RBP16.35■□□□□ 0.21
TRA2A-208ENST00000490942 LGI2Q8N0V4 545 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 ZNF687Q8N1G0 1237 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 RNF10Q8N5U6 811 aaKnown RBP16.35■□□□□ 0.21
TRA2A-208ENST00000490942 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.35■□□□□ 0.219e-8■□□□□ 9.9
TRA2A-208ENST00000490942 FIBINQ8TAL6 211 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 KCNV2Q8TDN2 545 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 RPRD1AQ96P16 312 aaPredicted RBP16.35■□□□□ 0.21
TRA2A-208ENST00000490942 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 TBC1D17Q9HA65 648 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 LTB4R2Q9NPC1 389 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 DONSONQ9NYP3 566 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 OR12D3Q9UGF7 316 aa16.35■□□□□ 0.21
TRA2A-208ENST00000490942 COL4A3Q01955 1670 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 LUC7L3O95232 432 aaKnown RBP16.34■□□□□ 0.21
TRA2A-208ENST00000490942 PTMAP06454 111 aaKnown RBP16.34■□□□□ 0.21
TRA2A-208ENST00000490942 KRT7P08729 469 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 CISD3P0C7P0 127 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 HOXC13P31276 330 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 HCAR3P49019 387 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 GALK1P51570 392 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 VCPP55072 806 aaKnown RBP16.34■□□□□ 0.21
TRA2A-208ENST00000490942 CDH4P55283 916 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 SLC25A11Q02978 314 aaKnown RBP16.34■□□□□ 0.21
TRA2A-208ENST00000490942 SEMA3BQ13214 749 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 SLC12A1Q13621 1099 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 LRRC32Q14392 662 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 DPYSL2Q16555 572 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 RAB6CQ53S08 254 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 GRAMD4Q6IC98 578 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 TXNDC11Q6PKC3 985 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 CYP4V2Q6ZWL3 525 aaPredicted RBP16.34■□□□□ 0.21
TRA2A-208ENST00000490942 PHTF2Q8N3S3 785 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 TTC8Q8TAM2 541 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 EPAS1Q99814 870 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 ZYG11BQ9C0D3 744 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 SIK2Q9H0K1 926 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 RAB6CQ9H0N0 254 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 VANGL2Q9ULK5 521 aa16.34■□□□□ 0.21
TRA2A-208ENST00000490942 RCCD1A6NED2 376 aa16.33■□□□□ 0.2
TRA2A-208ENST00000490942 E9PAM4 449 aa16.33■□□□□ 0.2
TRA2A-208ENST00000490942 TIMM44O43615 452 aa16.33■□□□□ 0.2
TRA2A-208ENST00000490942 TSPAN3O60637 253 aa16.33■□□□□ 0.2
TRA2A-208ENST00000490942 GPR37L1O60883 481 aa16.33■□□□□ 0.2
TRA2A-208ENST00000490942 TBL1XO60907 577 aa16.33■□□□□ 0.2
TRA2A-208ENST00000490942 APODP05090 189 aa16.33■□□□□ 0.2
TRA2A-208ENST00000490942 TNFRSF4P43489 277 aa16.33■□□□□ 0.2
TRA2A-208ENST00000490942 NOP2P46087 812 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms