RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 GRID1Q9ULK0 1009 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 SHOC2Q9UQ13 582 aa14.75□□□□□ -0.05
ARHGEF39-205ENST00000490638 A0A1W2PQH9 124 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 GNGT2O14610 69 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 EDNRBP24530 442 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 KATNAL2Q8IYT4 538 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 OXCT2Q9BYC2 517 aaPredicted RBP14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 IARS2Q9NSE4 1012 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 MSI1O43347 362 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 TYMPP19971 482 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 RAD23BP54727 409 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 JOSD2Q8TAC2 188 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 B3GALT6Q96L58 329 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 OMDQ99983 421 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 DEC1Q9P2X7 70 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 TRIM33Q9UPN9 1127 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 MYH14Q7Z406 1995 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 ARFIP2P53365 341 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 SNRPD1P62314 119 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 IL1RL1Q01638 556 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 PTK2BQ14289 1009 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 NDRG1Q92597 394 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 FBXO10Q9UK96 956 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 TBC1D4O60343 1298 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 RGS20O76081 388 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 CSF2RAP15509 400 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 LRRC38Q5VT99 294 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 ZDHHC6Q9H6R6 413 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 EML4Q9HC35 981 aaKnown RBP14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 ADAM21Q9UKJ8 722 aa14.74□□□□□ -0.05
ARHGEF39-205ENST00000490638 IL1BP01584 269 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 LMO2P25791 158 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 STX3Q13277 289 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 MPP3Q13368 585 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 ACOX1Q15067 660 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 SH2D3CQ8N5H7 860 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 ING5Q8WYH8 240 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 TACO1Q9BSH4 297 aaKnown RBP14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 NFKBIZQ9BYH8 718 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 FAM129AQ9BZQ8 928 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 PKD1L3Q7Z443 1732 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 TIMM44O43615 452 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 CYP1A2P05177 515 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 ADRA1BP35368 520 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 FLT3P36888 993 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 TM4SF4P48230 202 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 BRMS1LQ5PSV4 323 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 DAB2IPQ5VWQ8 1189 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 SNX31Q8N9S9 440 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 FAM161BQ96MY7 647 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 RNF157Q96PX1 679 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 TUBB6Q9BUF5 446 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 SPATA16Q9BXB7 569 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 C10orf88Q9H8K7 445 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 MPP6Q9NZW5 540 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 WHRNQ9P202 907 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 ATG7O95352 703 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 MYL2P10916 166 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 GOT1P17174 413 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 PTPN2P17706 415 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 KRT4P19013 534 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 HSPA9P38646 679 aaKnown RBP14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 SATB1Q01826 763 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 TSNAXIP1Q2TAA8 658 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 POM121L1PQ3SYA9 428 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 SGO1Q5FBB7 561 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 SPATA24Q86W54 205 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 CFAP52Q8N1V2 620 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 AUTS2Q8WXX7 1259 aa14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 PABPC3Q9H361 631 aaKnown RBP14.73□□□□□ -0.05
ARHGEF39-205ENST00000490638 ARHGAP10A1A4S6 786 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 HACD1B0YJ81 288 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 ZNF865P0CJ78 1059 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 PTPN7P35236 360 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 THOP1P52888 689 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 SLC25A52Q3SY17 297 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 PMF1Q6P1K2 205 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 CASKIN2Q8WXE0 1202 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 SKA1Q96BD8 255 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 EXOC2Q96KP1 924 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 HNRNPABQ99729 332 aaKnown RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 ROPN1BQ9BZX4 212 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 ROPN1Q9HAT0 212 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 WWOXQ9NZC7 414 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 TBC1D14Q9P2M4 693 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 PCDHGC5Q9Y5F6 944 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 DAB1O75553 588 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 SOAT2O75908 522 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 DCTN3O75935 186 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 SESN3P58005 492 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 TTC31Q49AM3 519 aaPredicted RBP14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 SERINC5Q86VE9 423 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 PPP1R36Q96LQ0 422 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 KCNK16Q96T55 309 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 DPEP3Q9H4B8 488 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 NRDE2Q9H7Z3 1164 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 CDHR5Q9HBB8 845 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 CHST7Q9NS84 486 aa14.72□□□□□ -0.05
ARHGEF39-205ENST00000490638 C5P01031 1676 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms