RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 MATKP42679 507 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 NUMBP49757 651 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 ZNF445P59923 1031 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 LMAN2Q12907 356 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 PTP4A2Q12974 167 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 ENPP2Q13822 863 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 RAB6CQ53S08 254 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 CHST9Q7L1S5 443 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 C14orf80Q86SX3 495 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 CHSY1Q86X52 802 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 ZNF677Q86XU0 584 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 ZDHHC17Q8IUH5 632 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 PGBD3Q8N328 593 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 ZNF366Q8N895 744 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 HJURPQ8NCD3 748 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-214ENST00000490398 BAP1Q92560 729 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 ZC3H10Q96K80 434 aaKnown RBP18.78■□□□□ 0.6
COL9A3-214ENST00000490398 TBCBQ99426 244 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 RAB6CQ9H0N0 254 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 ARRDC1-AS1Q9H2J1 176 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 SMOC1Q9H4F8 434 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 TMPRSS4Q9NRS4 437 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 PIGVQ9NUD9 493 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL9A3-214ENST00000490398 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL9A3-214ENST00000490398 TMEM59LQ9UK28 342 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 INTS6Q9UL03 887 aaKnown RBP18.78■□□□□ 0.6
COL9A3-214ENST00000490398 SDK1Q7Z5N4 2213 aa18.78■□□□□ 0.6
COL9A3-214ENST00000490398 A0A1B0GTH6 734 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 ALDH1A2O94788 518 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 ADCY5O95622 1261 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 PABPC1P11940 636 aaKnown RBP18.77■□□□□ 0.6
COL9A3-214ENST00000490398 UNGP13051 313 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-214ENST00000490398 HLA-EP13747 358 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 P2RY2P41231 377 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 SULT1E1P49888 294 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 PTPRNQ16849 979 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 ZSCAN23Q3MJ62 389 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 FUT11Q495W5 492 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 USP39Q53GS9 565 aaKnown RBP18.77■□□□□ 0.6
COL9A3-214ENST00000490398 MPP7Q5T2T1 576 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 MFN1Q8IWA4 741 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 CARNMT1Q8N4J0 409 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 EMC1Q8N766 993 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 IGSF8Q969P0 613 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 NT5C3BQ969T7 300 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 BTN2A3PQ96KV6 586 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 C11orf70Q9BRQ4 267 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 DAAM1Q9Y4D1 1078 aa18.77■□□□□ 0.6
COL9A3-214ENST00000490398 EPN2O95208 641 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 MMP8P22894 467 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 GBP1P32455 592 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 SNX16P57768 344 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 ARTNQ5T4W7 220 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 E4F1Q66K89 784 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-214ENST00000490398 MBLAC2Q68D91 279 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 SDE2Q6IQ49 451 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 ATP6V0D2Q8N8Y2 350 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 JOSD2Q8TAC2 188 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 FIBINQ8TAL6 211 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 RNF34Q969K3 372 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 DDX50Q9BQ39 737 aaKnown RBP18.76■□□□□ 0.59
COL9A3-214ENST00000490398 MKRN2Q9H000 416 aaKnown RBP18.76■□□□□ 0.59
COL9A3-214ENST00000490398 METTL5Q9NRN9 209 aaKnown RBP18.76■□□□□ 0.59
COL9A3-214ENST00000490398 SEMA4GQ9NTN9 838 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 USP18Q9UMW8 372 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 HS3ST4Q9Y661 456 aa18.76■□□□□ 0.59
COL9A3-214ENST00000490398 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.76■□□□□ 0.59
COL9A3-214ENST00000490398 PAGE1O75459 146 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 CCR1P32246 355 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 SCNN1AP37088 669 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 CTSOP43234 321 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-214ENST00000490398 CXCR3P49682 368 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 CENPCQ03188 943 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 NR1I3Q14994 352 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 EIF4HQ15056 248 aaKnown RBP18.75■□□□□ 0.59
COL9A3-214ENST00000490398 CLEC16AQ2KHT3 1053 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 PMS2CLQ68D20 193 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 FBXL22Q6P050 247 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 IRF2BP2Q7Z5L9 587 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 DEFB119Q8N690 84 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 WFIKKN2Q8TEU8 576 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 MRGPRX1Q96LB2 322 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 CFAP57Q96MR6 1250 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 AGPAT1Q99943 283 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 IRX2Q9BZI1 471 aaPredicted RBP18.75■□□□□ 0.59
COL9A3-214ENST00000490398 MTG2Q9H4K7 406 aa18.75■□□□□ 0.59
COL9A3-214ENST00000490398 MUC22E2RYF6 1773 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-214ENST00000490398 F5H5T6 163 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 LUC7L3O95232 432 aaKnown RBP18.74■□□□□ 0.59
COL9A3-214ENST00000490398 ABCB4P21439 1286 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 COPAP53621 1224 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 AUHQ13825 339 aaKnown RBP18.74■□□□□ 0.59
COL9A3-214ENST00000490398 SF3A2Q15428 464 aaKnown RBP18.74■□□□□ 0.59
COL9A3-214ENST00000490398 SH3PXD2AQ5TCZ1 1133 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 BNIPLQ7Z465 357 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 DNAAF5Q86Y56 855 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 APCDD1Q8J025 514 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 AHI1Q8N157 1196 aa18.74■□□□□ 0.59
COL9A3-214ENST00000490398 OR52K2Q8NGK3 314 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms