RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 OR10S1Q8NGN2 331 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ETNPPLQ8TBG4 499 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ABHD5Q8WTS1 349 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 SNX21Q969T3 373 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 TMCO6Q96DC7 493 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 HRASLS5Q96KN8 279 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 DNAI2Q9GZS0 605 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ARMT1Q9H993 441 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 SLC39A2Q9NP94 309 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 SH2B3Q9UQQ2 575 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 OSGIN2Q9Y236 505 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 MAB21L2Q9Y586 359 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 DHX29Q7Z478 1369 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 UBR1Q8IWV7 1749 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 H3BS24 57 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 AGPSO00116 658 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PTGESO14684 152 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PNPP00491 289 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 GRPP07492 148 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 GLI1P08151 1106 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 FSTP19883 344 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ALDH1A3P47895 512 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 EIF4A1P60842 406 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 IL1RL1Q01638 556 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 C17orf67Q0P5P2 114 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 NEXNQ0ZGT2 675 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 OLIG2Q13516 323 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 WSCD2Q2TBF2 565 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 CCDC158Q5M9N0 1113 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 IYDQ6PHW0 289 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF551Q7Z340 670 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 TCP11L2Q8N4U5 519 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 MINDY1Q8N5J2 469 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 RTL3Q8N8U3 475 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 SYT2Q8N9I0 419 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 GDAP1Q8TB36 358 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 SLC5A11Q8WWX8 675 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PRPF31Q8WWY3 499 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 LBHD1Q9BQE6 289 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 NTPCRQ9BSD7 190 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 TEX12Q9BXU0 123 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 EPC1Q9H2F5 836 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 SERHL2Q9H4I8 314 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 IL1RAPL2Q9NP60 686 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PIM2Q9P1W9 311 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 USP18Q9UMW8 372 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PZPP20742 1482 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ABCC3O15438 1527 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 IQGAP1P46940 1657 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 GPR75-ASB3A0A0A6YYF3 556 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 CBY3A6NI87 242 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 GCOM1H8Y6P7 765 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 AKR1B10O60218 316 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 WNT1P04628 370 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 URODP06132 367 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PRKCAP17252 672 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 TNNT2P45379 298 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 RPS3AP61247 264 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PSMC6P62333 389 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PKP1Q13835 747 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 WDR73Q6P4I2 378 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ALKBH5Q6P6C2 394 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 GJB7Q6PEY0 223 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PPP1R42Q7Z4L9 355 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 RASGRP3Q8IV61 690 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 CMTM4Q8IZR5 234 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PPM1NQ8N819 430 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 OR52N2Q8NGI0 321 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 FRAT1Q92837 279 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 DESI2Q9BSY9 194 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 PAK6Q9NQU5 681 aaPredicted RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 DRG1Q9Y295 367 aaKnown RBP3.18□□□□□ -1.9
UBXN4-208ENST00000490163 ACTL7AQ9Y615 435 aa3.18□□□□□ -1.9
UBXN4-208ENST00000490163 CLTCL1P53675 1640 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 NRXN3Q9Y4C0 1643 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ADGRB3O60242 1522 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TTC36A6NLP5 189 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 BTBD11A6QL63 1104 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TIPRLO75663 272 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TPOP07202 933 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 CD72P21854 359 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 KLRK1P26718 216 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ABCD1P33897 745 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 MSH2P43246 934 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 CLK3P49761 638 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 RPL15P61313 204 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 CYP4F2P78329 520 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 MGAT5Q09328 741 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 ZNF789Q5FWF6 425 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 FAM102AQ5T9C2 384 aaPredicted RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 THNSL1Q8IYQ7 743 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 PLD6Q8N2A8 252 aaKnown RBP3.17□□□□□ -1.9
UBXN4-208ENST00000490163 TTLL6Q8N841 843 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 FUT8Q9BYC5 575 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 PDCL3Q9H2J4 239 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 NDST4Q9H3R1 872 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 CNNM1Q9NRU3 951 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 NAIPQ13075 1403 aa3.17□□□□□ -1.9
UBXN4-208ENST00000490163 CENPJQ9HC77 1338 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms