RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 RFWD3Q6PCD5 774 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 PIP4P1Q86T03 277 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 FAM71AQ8IYT1 594 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 ZNF557Q8N988 423 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 KDM1BQ8NB78 822 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 C1orf216Q8TAB5 229 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 WFDC5Q8TCV5 224 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 GOLGA1Q92805 767 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 MYO19Q96H55 970 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 PRICKLE1Q96MT3 831 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 SERPINB11Q96P15 392 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC2A13Q96QE2 648 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 PCED1AQ9H1Q7 454 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 PRDM16Q9HAZ2 1276 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 CD93Q9NPY3 652 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 TMEM9BQ9NQ34 198 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 ASNSD1Q9NWL6 643 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 GGA2Q9UJY4 613 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 AJAP1Q9UKB5 411 aaPredicted RBP10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC6A14Q9UN76 642 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 WASF3Q9UPY6 502 aa10.1□□□□□ -0.79
TMEM39A-210ENST00000490099 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 E5RJQ4 531 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 FOXN3O00409 490 aaPredicted RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 SYNCRIPO60506 623 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 GJB3O75712 270 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 PABPC1P11940 636 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 CEACAM1P13688 526 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 OXTRP30559 389 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 GNA15P30679 374 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 CD70P32970 193 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 CLCN1P35523 988 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 RPS24P62847 133 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 KCNMA1Q12791 1236 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 SEMA3BQ13214 749 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 TAF5Q15542 800 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 MAN2A1Q16706 1144 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 VWA3BQ502W6 1294 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 DAB2IPQ5VWQ8 1189 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 MBLAC2Q68D91 279 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 RBM43Q6ZSC3 357 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 CHST9Q7L1S5 443 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 ARMCX6Q7L4S7 300 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 RABEPKQ7Z6M1 372 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 TAC4Q86UU9 113 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 AHI1Q8N157 1196 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 OR2T3Q8NH03 318 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 FOXJ1Q92949 421 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 TOE1Q96GM8 510 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 PRMT1Q99873 361 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 DDX50Q9BQ39 737 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 NAA15Q9BXJ9 866 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 CIPCQ9C0C6 399 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 NDST4Q9H3R1 872 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 FBRSQ9HAH7 460 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 POPDC2Q9HBU9 364 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 LMBRD1Q9NUN5 540 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 ABCB8Q9NUT2 735 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 TJP2Q9UDY2 1190 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 INTS6Q9UL03 887 aaKnown RBP10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 CYP8B1Q9UNU6 501 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 PLA2G4CQ9UP65 541 aa10.09□□□□□ -0.79
TMEM39A-210ENST00000490099 CACNA1BQ00975 2339 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 PCDH15Q96QU1 1955 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 CEP192Q8TEP8 1941 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 THAP12O43422 761 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 TBL1XO60907 577 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 TRUB2O95900 331 aaKnown RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 ATP5BP06576 529 aaKnown RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 ENGP17813 658 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 CDH5P33151 784 aaPredicted RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 PLK1P53350 603 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 PITX1P78337 314 aaPredicted RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 ZBTB16Q05516 673 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 ARHGAP44Q17R89 818 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 DCAF6Q58WW2 860 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 ZC3H12AQ5D1E8 599 aaKnown RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 FSCBQ5H9T9 825 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 SERPINA13PQ6UXR4 307 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 DEFB119Q8N690 84 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 HJURPQ8NCD3 748 aaPredicted RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 ZNF397Q8NF99 534 aaPredicted RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 CYB5D2Q8WUJ1 264 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 PRCCQ92733 491 aaPredicted RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 NT5C3BQ969T7 300 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 FAM149B1Q96BN6 582 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 SIPA1Q96FS4 1042 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 BTN2A3PQ96KV6 586 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 MRGPRX3Q96LB0 322 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 HSPA12BQ96MM6 686 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 GBP4Q96PP9 640 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 CPXM1Q96SM3 734 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 TUBGCP2Q9BSJ2 902 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 NUP58Q9BVL2 599 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 NUSAP1Q9BXS6 441 aaKnown RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 NUCKS1Q9H1E3 243 aaKnown RBP10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 PRSS16Q9NQE7 514 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 ST7Q9NRC1 585 aa10.08□□□□□ -0.8
TMEM39A-210ENST00000490099 DNAAF2Q9NVR5 837 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms