RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 RPS13P62277 151 aaKnown RBP5.89□□□□□ -1.47
CCDC39-206ENST00000489868 TLE3Q04726 772 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 PGM5Q15124 567 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 CCDC174Q6PII3 467 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 SHC4Q6S5L8 630 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 UBE2Q1Q7Z7E8 422 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 NANOGP1Q8N7R0 232 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 ARL14EPQ8N8R7 260 aaPredicted RBP5.89□□□□□ -1.47
CCDC39-206ENST00000489868 C16orf52Q8NHV5 167 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 SCARB1Q8WTV0 552 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 SMG7Q92540 1137 aaKnown RBP5.89□□□□□ -1.47
CCDC39-206ENST00000489868 RSC1A1Q92681 617 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 RPS6KC1Q96S38 1066 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 MAGEH1Q9H213 219 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 SEPSECSQ9HD40 501 aaKnown RBP5.89□□□□□ -1.47
CCDC39-206ENST00000489868 ELOVL5Q9NYP7 299 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 AFG3L2Q9Y4W6 797 aa5.89□□□□□ -1.47
CCDC39-206ENST00000489868 ACTL6BO94805 426 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 ITGA2BP08514 1039 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 PRF1P14222 555 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 VEGFAP15692 232 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-206ENST00000489868 CPA2P48052 419 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 ID2Q02363 134 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 RBMS2Q15434 407 aaKnown RBP5.88□□□□□ -1.47
CCDC39-206ENST00000489868 ANXA2RQ3ZCQ2 193 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 KIAA1324Q6UXG2 1013 aaKnown RBP5.88□□□□□ -1.47
CCDC39-206ENST00000489868 SLC39A5Q6ZMH5 540 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 MYLK4Q86YV6 388 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-206ENST00000489868 SLC44A2Q8IWA5 706 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-206ENST00000489868 NRACQ8N912 160 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 ZFPM2Q8WW38 1151 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 CUL5Q93034 780 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 PRDM16Q9HAZ2 1276 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 PI4KBQ9UBF8 816 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.88□□□□□ -1.47
CCDC39-206ENST00000489868 EMSYQ7Z589 1322 aa5.88□□□□□ -1.47
CCDC39-206ENST00000489868 PEX14O75381 377 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 HEXIM1O94992 359 aaKnown RBP5.87□□□□□ -1.47
CCDC39-206ENST00000489868 TRAPPC10P48553 1259 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 RBM6P78332 1123 aaKnown RBP5.87□□□□□ -1.47
CCDC39-206ENST00000489868 BLMHQ13867 455 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 GALNTL6Q49A17 601 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 CCDC38Q502W7 563 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 TTC22Q5TAA0 569 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 RTL10Q7L3V2 364 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 UEVLDQ8IX04 471 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 PIGOQ8TEQ8 1089 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 HMGB4Q8WW32 186 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 PMM1Q92871 262 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 PIMREGQ9BSJ6 248 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 ABHD14AQ9BUJ0 271 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 TRIM2Q9C040 744 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 ARHGAP39Q9C0H5 1083 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 HEY2Q9UBP5 337 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 HERC5Q9UII4 1024 aaKnown RBP5.87□□□□□ -1.47
CCDC39-206ENST00000489868 NFU1Q9UMS0 254 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 TTBK1Q5TCY1 1321 aaPredicted RBP5.87□□□□□ -1.47
CCDC39-206ENST00000489868 ZNF521Q96K83 1311 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 ZMYM2Q9UBW7 1377 aa5.87□□□□□ -1.47
CCDC39-206ENST00000489868 CYP3A7-CYP3A51PA0A087WV96 503 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 LY6G6EA0A0G2JKS1 128 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 AGAP5A6NIR3 686 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 LDHAP00338 332 aaKnown RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 FGBP02675 491 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 WNT1P04628 370 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 ALDOCP09972 364 aaKnown RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 AKR1A1P14550 325 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 CYP3A7P24462 503 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 GRK5P34947 590 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 AP2B1P63010 937 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 RNASELQ05823 741 aaKnown RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 SRSF1Q07955 248 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 FAM83BQ5T0W9 1011 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 TANGO2Q6ICL3 276 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 JMJD6Q6NYC1 403 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 NFRKBQ6P4R8 1299 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 FAM57BQ71RH2 274 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 SRFBP1Q8NEF9 429 aaKnown RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 OR52N4Q8NGI2 321 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 BCAS4Q8TDM0 211 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 OTUD7AQ8TE49 926 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 ATP2A3Q93084 1043 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 SORBS1Q9BX66 1292 aaKnown RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 OSBPL5Q9H0X9 879 aaPredicted RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 PTPRHQ9HD43 1115 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 TMEM45AQ9NWC5 275 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 RCE1Q9Y256 329 aa5.86□□□□□ -1.47
CCDC39-206ENST00000489868 COPG1Q9Y678 874 aaKnown RBP5.86□□□□□ -1.47
CCDC39-206ENST00000489868 A0A0G2JK05 382 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 IPO5O00410 1097 aaKnown RBP5.85□□□□□ -1.47
CCDC39-206ENST00000489868 UGDHO60701 494 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 LARGE1O95461 756 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 SGPL1O95470 568 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 ALDOAP04075 364 aaKnown RBP5.85□□□□□ -1.47
CCDC39-206ENST00000489868 CD63P08962 238 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 TFEBP19484 476 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 TGM2P21980 687 aa5.85□□□□□ -1.47
CCDC39-206ENST00000489868 CHKAP35790 457 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms