RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TOB1P50616 345 aaPredicted RBP3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 C17orf67Q0P5P2 114 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 CUL4AQ13619 759 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 RASA2Q15283 850 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 MAP3K21Q5TCX8 1036 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 FBXO38Q6PIJ6 1188 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 FAM90A1Q86YD7 464 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 TSPYL6Q8N831 410 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 VGLL2Q8N8G2 317 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 LILRB1Q8NHL6 650 aaPredicted RBP3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 DPF1Q92782 380 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 RFKQ969G6 155 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 NMD3Q96D46 503 aaKnown RBP3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 VMP1Q96GC9 406 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 CCDC34Q96HJ3 373 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 ACTRT3Q9BYD9 372 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 TAF1DQ9H5J8 278 aaPredicted RBP3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 ABCF3Q9NUQ8 709 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 CFAP97Q9P2B7 532 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 DKK3Q9UBP4 350 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 RPS6KA6Q9UK32 745 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 ZNF580Q9UK33 172 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 DAPP1Q9UN19 280 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 AOX1Q06278 1338 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 SPATA31A3Q5VYP0 1347 aa3.5□□□□□ -1.85
DEPDC1-204ENST00000489862 CLCA1A8K7I4 914 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 PRR23D1E9PI22 279 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 BTN3A1O00481 513 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 SLC16A6O15403 523 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 TRIAP1O43715 76 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 SLC4A1P02730 911 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 PRR23D2P0DMB1 279 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 MYCLP12524 364 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 PECAM1P16284 738 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 ALOX12P18054 663 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 KLRK1P26718 216 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 TKTP29401 623 aaKnown RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 PIK3CGP48736 1102 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 MMP14P50281 582 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 HSD17B7P56937 341 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 NLRP5P59047 1200 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 PPARDQ03181 441 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 CTBP1Q13363 440 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 TDGQ13569 410 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 SCARB2Q14108 478 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 TBCEQ15813 527 aaPredicted RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 RBM20Q5T481 1227 aaKnown RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 ANKRD45Q5TZF3 282 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 KIAA0408Q6ZU52 694 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 NGEFQ8N5V2 710 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 OR8H1Q8NGG4 311 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 CEP70Q8NHQ1 597 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 THAP4Q8WY91 577 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 TNPO1Q92973 898 aaKnown RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 RNF125Q96EQ8 232 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 PBKQ96KB5 322 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 ADPGKQ9BRR6 497 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 CHST8Q9H2A9 424 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 MRPL46Q9H2W6 279 aaKnown RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 EPS8L2Q9H6S3 715 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 GPR35Q9HC97 309 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 SEPT11Q9NVA2 429 aaKnown RBP3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 RLIMQ9NVW2 624 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 HSF4Q9ULV5 492 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 PSAT1Q9Y617 370 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 WNT6Q9Y6F9 365 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 UGGT2Q9NYU1 1516 aa3.49□□□□□ -1.85
DEPDC1-204ENST00000489862 PCDH17O14917 1159 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TGFB1I1O43294 461 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 DNPH1O43598 174 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 TTLL1O95922 423 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PDHA1P08559 390 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PSMA3P25788 255 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 GGT5P36269 586 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 MLH1P40692 756 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 SOX10P56693 466 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 SOX8P57073 446 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 SLC13A2Q13183 592 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 BOP1Q14137 746 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 EFR3AQ14156 821 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PSMD6Q15008 389 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 FAM153CQ494X1 144 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 MMEL1Q495T6 779 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 FCRLBQ6BAA4 426 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 NFRKBQ6P4R8 1299 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 KLHL17Q6TDP4 642 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 UNC5DQ6UXZ4 953 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 RNF44Q7L0R7 432 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 KDELC2Q7Z4H8 507 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 USP37Q86T82 979 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 IQCA1Q86XH1 822 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 RAB11FIP4Q86YS3 637 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 PCSK9Q8NBP7 692 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 KCTD6Q8NC69 237 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 HASPINQ8TF76 798 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 CCDC47Q96A33 483 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 FKBP10Q96AY3 582 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 NSUN4Q96CB9 384 aaKnown RBP3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 EID2BQ96D98 161 aa3.48□□□□□ -1.85
DEPDC1-204ENST00000489862 MTFMTQ96DP5 389 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms