RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 VASH2Q86V25 355 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 SRRM1Q8IYB3 904 aaKnown RBP15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 B3GALNT2Q8NCR0 500 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 ZSWIM2Q8NEG5 633 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 OR14C36Q8NHC7 312 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 SSC4DQ8WTU2 575 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 MED10Q9BTT4 135 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 ZHX3Q9H4I2 956 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 FBXO44Q9H4M3 255 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 OSER1Q9NX31 292 aa15.28■□□□□ 0.04
SDHAF3-204ENST00000489852 LATO43561 262 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 TACC1O75410 805 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 TCEA3O75764 348 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 CD97P48960 835 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 ZNF131P52739 623 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 OXCT1P55809 520 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 POLE2P56282 527 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 EHHADHQ08426 723 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 CST6Q15828 149 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 C10orf120Q5SQS8 335 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 BORAQ6PGQ7 559 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 KLHDC10Q6PID8 442 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 CHST9Q7L1S5 443 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 TPCN2Q8NHX9 752 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 WFIKKN2Q8TEU8 576 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 SAAL1Q96ER3 474 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 ANKRD36BP1Q96IX9 119 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 KDM4CQ9H3R0 1056 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 MTG2Q9H4K7 406 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 PDE11AQ9HCR9 933 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 TUBD1Q9UJT1 453 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 ACSL6Q9UKU0 697 aa15.27■□□□□ 0.04
SDHAF3-204ENST00000489852 SPENQ96T58 3664 aaKnown RBP15.27■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3DA0A087WVF3 549 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3IA0A087WXS9 549 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3EA0A087X179 549 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3KA0A087X1G2 549 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 CPED1A4D0V7 1026 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3FA6NER0 549 aaPredicted RBP15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 NEMP2A6NFY4 417 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 A8MXQ7 604 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3LB9A6J9 549 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 PLD2O14939 933 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 DLDP09622 509 aaKnown RBP15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3HP0C7X1 549 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 WT1P19544 449 aaPredicted RBP15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 HLA-FP30511 346 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 DCTP40126 519 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 ADPRHP54922 357 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 PPP2CBP62714 309 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 PPP2CAP67775 309 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 ZNF177Q13360 481 aaPredicted RBP15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 CDKN3Q16667 212 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 HYIQ5T013 277 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3GQ6DHY5 549 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3CQ6IPX1 549 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 FAM35AQ86V20 835 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TBC1D3Q8IZP1 549 aaPredicted RBP15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 KCTD17Q8N5Z5 321 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 FIZ1Q96SL8 496 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 DUSP23Q9BVJ7 150 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 KLHL11Q9NVR0 708 aa15.26■□□□□ 0.03
SDHAF3-204ENST00000489852 TDRD6O60522 2096 aaKnown RBP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 PIAS2O75928 621 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 ATP5BP06576 529 aaKnown RBP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 RARGP13631 454 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 COL8A1P27658 744 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 CORO1AP31146 461 aaKnown RBP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 GUCY1B3Q02153 619 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 GNL2Q13823 731 aaKnown RBP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 IL17AQ16552 155 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 CRTC1Q6UUV9 634 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 SND1Q7KZF4 910 aaKnown RBP eCLIP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 EFL1Q7Z2Z2 1120 aaKnown RBP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 ADIPOR2Q86V24 386 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 GPBP1Q86WP2 473 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 MMAAQ8IVH4 418 aaKnown RBP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 FBXO39Q8N4B4 442 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 KLHDC7BQ96G42 594 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 SMARCD1Q96GM5 515 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 CDK5RAP3Q96JB5 506 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 TM6SF1Q9BZW5 370 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 DCLK3Q9C098 648 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 ZNF71Q9NQZ8 489 aaPredicted RBP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 ARHGAP20Q9P2F6 1191 aa15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 AGO1Q9UL18 857 aaKnown RBP15.25■□□□□ 0.03
SDHAF3-204ENST00000489852 K7ESM1 405 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 MTSS1O43312 755 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 SIN3BO75182 1162 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 AP1G2O75843 785 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 LDHAP00338 332 aaKnown RBP15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 TNNC2P02585 160 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 HMBSP08397 361 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 FAM163BP0C2L3 166 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 GOT1P17174 413 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 MAT2AP31153 395 aaKnown RBP15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 SLC8A1P32418 973 aa15.24■□□□□ 0.03
SDHAF3-204ENST00000489852 KCNMA1Q12791 1236 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms