RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 PDE1CQ14123 709 aaPredicted RBP16.16■□□□□ 0.18
BRD9-208ENST00000489816 CHSY1Q86X52 802 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 CRLF3Q8IUI8 442 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 PNPLA1Q8N8W4 532 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 HIPK4Q8NE63 616 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 QKIQ96PU8 341 aaKnown RBP eCLIP16.16■□□□□ 0.18
BRD9-208ENST00000489816 PTPN18Q99952 460 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 SIK2Q9H0K1 926 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 FLRT1Q9NZU1 646 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 ZFATQ9P243 1243 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 PACSIN3Q9UKS6 424 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 A0A0G2JMZ2 1700 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 CASTOR2A6NHX0 329 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 FAM159BA6NKW6 160 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 TYK2P29597 1187 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 PTPN9P43378 593 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 PAQR9Q6ZVX9 377 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 RBM15BQ8NDT2 890 aaKnown RBP16.16■□□□□ 0.18
BRD9-208ENST00000489816 ARNTL2Q8WYA1 636 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 MFSD3Q96ES6 412 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 GAD1Q99259 594 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 XPNPEP3Q9NQH7 507 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 PNPOQ9NVS9 261 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 TMEM216Q9P0N5 145 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 FZD10Q9ULW2 581 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 WASF2Q9Y6W5 498 aa16.16■□□□□ 0.18
BRD9-208ENST00000489816 SDR42E2A6NKP2 422 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 EEF2KO00418 725 aaKnown RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 SORBS2O94875 1100 aaKnown RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 SRGAP2BP0DMP2 458 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 CERCAMQ5T4B2 595 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 OTUD1Q5VV17 481 aaPredicted RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 C10orf107Q8IVU9 208 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 TEX9Q8N6V9 391 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 LRRC52Q8N7C0 313 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 SMC1BQ8NDV3 1235 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 FCRL3Q96P31 734 aaPredicted RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 PLEKHA5Q9HAU0 1116 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 TRDMT1O14717 391 aaKnown RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 BPGMP07738 259 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 PTPN1P18031 435 aaKnown RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 ERCC2P18074 760 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 ABL2P42684 1182 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 WASHC5Q12768 1159 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 CRYMQ14894 314 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 KYAT1Q16773 422 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 SLC25A52Q3SY17 297 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 PACS1Q6VY07 963 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 TLK2Q86UE8 772 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 SHCBP1Q8NEM2 672 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 ACVR1CQ8NER5 493 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 ZNF669Q96BR6 464 aaPredicted RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 NAF1Q96HR8 494 aaKnown RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 C11orf84Q9BUA3 381 aaPredicted RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 PHACTR1Q9C0D0 580 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 CYP4F11Q9HBI6 524 aa16.15■□□□□ 0.18
BRD9-208ENST00000489816 DDX43Q9NXZ2 648 aaKnown RBP16.15■□□□□ 0.18
BRD9-208ENST00000489816 HSP90AA5PQ58FG0 334 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 LDLRAD1Q5T700 205 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 ARHGAP17Q68EM7 881 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 CLEC20AQ6ZU45 233 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 UNC93AQ86WB7 457 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 RASSF3Q86WH2 238 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 CRYBG2Q8N1P7 616 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 PLD6Q8N2A8 252 aaKnown RBP16.14■□□□□ 0.17
BRD9-208ENST00000489816 CENPIQ92674 756 aaPredicted RBP16.14■□□□□ 0.17
BRD9-208ENST00000489816 ZNF778Q96MU6 729 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 PNPLA8Q9NP80 782 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 SAR1AQ9NR31 198 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 DDIT4Q9NX09 232 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 SETSIPP0DME0 302 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 USP4Q13107 963 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 SEMA5AQ13591 1074 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 ITGA9Q13797 1035 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 MFSD10Q14728 455 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 MUM1Q2TAK8 710 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 ATG16L1Q676U5 607 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 ALKAL1Q6UXT8 129 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 TTC39CQ8N584 583 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 CCDC124Q96CT7 223 aaKnown RBP16.14■□□□□ 0.17
BRD9-208ENST00000489816 XAB2Q9HCS7 855 aaKnown RBP16.14■□□□□ 0.17
BRD9-208ENST00000489816 EMCNQ9ULC0 261 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 GNAZP19086 355 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 ARRB2P32121 409 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 MAGEA3P43357 314 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 SLC8A3P57103 927 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 SLC25A3Q00325 362 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 OCRLQ01968 901 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 LRRC36Q1X8D7 754 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 EFHC1Q5JVL4 640 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 NT5DC4Q86YG4 428 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 NPWQ8N729 165 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 SMG8Q8ND04 991 aaKnown RBP16.14■□□□□ 0.17
BRD9-208ENST00000489816 MCUQ8NE86 351 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 FAXDC2Q96IV6 333 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 MOCS1Q9NZB8 636 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 USP3Q9Y6I4 520 aa16.14■□□□□ 0.17
BRD9-208ENST00000489816 LOC285556D6RIA3 1793 aa16.13■□□□□ 0.17
BRD9-208ENST00000489816 DNAJC6O75061 913 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms