RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ARHGEF38Q9NXL2 777 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 STIM2Q9P246 746 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 HCN2Q9UL51 889 aa17.96■□□□□ 0.47
MDC1-206ENST00000489540 WDFY4Q6ZS81 3184 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 MYOFQ9NZM1 2061 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 ADAM23O75077 832 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 ENDOD1O94919 500 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 LMNAP02545 664 aaKnown RBP17.95■□□□□ 0.46
MDC1-206ENST00000489540 GZMAP12544 262 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 TFE3P19532 575 aaPredicted RBP17.95■□□□□ 0.46
MDC1-206ENST00000489540 HLA-FP30511 346 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 SDC4P31431 198 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 RDXP35241 583 aaKnown RBP17.95■□□□□ 0.46
MDC1-206ENST00000489540 RABGAP1LQ5R372 815 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 TTC39BQ5VTQ0 682 aaPredicted RBP17.95■□□□□ 0.46
MDC1-206ENST00000489540 E4F1Q66K89 784 aaPredicted RBP17.95■□□□□ 0.46
MDC1-206ENST00000489540 TRNP1Q6NT89 227 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 BNIPLQ7Z465 357 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 KIAA0907Q7Z7F0 614 aaPredicted RBP17.95■□□□□ 0.46
MDC1-206ENST00000489540 MFN1Q8IWA4 741 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 EMC1Q8N766 993 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 ADAM33Q9BZ11 813 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 TKTL2Q9H0I9 626 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 ABCB8Q9NUT2 735 aa17.95■□□□□ 0.46
MDC1-206ENST00000489540 ANKRD62A6NC57 917 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 C2CD4BA6NLJ0 364 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 AXIN1O15169 862 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 PAGE1O75459 146 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 PABPC1P11940 636 aaKnown RBP17.94■□□□□ 0.46
MDC1-206ENST00000489540 SKILP12757 684 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 MRE11P49959 708 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 CCDC14Q49A88 953 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 SPECC1LQ69YQ0 1117 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 DNAJC24Q6P3W2 148 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 TMEM92Q6UXU6 159 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 VPS36Q86VN1 386 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 AHI1Q8N157 1196 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 CFAP52Q8N1V2 620 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 OLIG1Q8TAK6 271 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 MYEOVQ96EZ4 313 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 C1orf74Q96LT6 269 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 CIPCQ9C0C6 399 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 ZDHHC4Q9NPG8 344 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 THAP10Q9P2Z0 257 aaPredicted RBP17.94■□□□□ 0.46
MDC1-206ENST00000489540 GGA2Q9UJY4 613 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 HS3ST4Q9Y661 456 aa17.94■□□□□ 0.46
MDC1-206ENST00000489540 TCRBV5S1A1TA0A578 114 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 H0Y626 953 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 DDX3XO00571 662 aaKnown RBP eCLIP17.93■□□□□ 0.46
MDC1-206ENST00000489540 ZBTB24O43167 697 aaPredicted RBP17.93■□□□□ 0.46
MDC1-206ENST00000489540 HRO43593 1189 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 ADCY5O95622 1261 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 GYPCP04921 128 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 SERPING1P05155 500 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 HOXC13P31276 330 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 RFC1P35251 1148 aaPredicted RBP17.93■□□□□ 0.46
MDC1-206ENST00000489540 PTPN9P43378 593 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 PXNP49023 591 aaPredicted RBP17.93■□□□□ 0.46
MDC1-206ENST00000489540 ATP11AP98196 1134 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 CDH18Q13634 790 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 AUHQ13825 339 aaKnown RBP17.93■□□□□ 0.46
MDC1-206ENST00000489540 TRIM14Q14142 442 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 FBXL22Q6P050 247 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 ALYREFQ86V81 257 aaKnown RBP17.93■□□□□ 0.46
MDC1-206ENST00000489540 CARNMT1Q8N4J0 409 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 JOSD2Q8TAC2 188 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 HAPLN3Q96S86 360 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 GABRG3Q99928 467 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 EPC1Q9H2F5 836 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 TAS2R14Q9NYV8 317 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 PLA2G4CQ9UP65 541 aa17.93■□□□□ 0.46
MDC1-206ENST00000489540 PRR23AA6NEV1 266 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 TMCO5BA8MYB1 307 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 GFRA3O60609 400 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 RTN2O75298 545 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 LUC7L3O95232 432 aaKnown RBP17.92■□□□□ 0.46
MDC1-206ENST00000489540 FTLP02792 175 aaPredicted RBP17.92■□□□□ 0.46
MDC1-206ENST00000489540 ATP5BP06576 529 aaKnown RBP17.92■□□□□ 0.46
MDC1-206ENST00000489540 HOXB2P14652 356 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 RRM1P23921 792 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 CASP14P31944 242 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 OXCT1P55809 520 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 TDRD12Q587J7 1177 aaKnown RBP17.92■□□□□ 0.46
MDC1-206ENST00000489540 HGSNATQ68CP4 663 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 TMEM215Q68D42 235 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 WDR59Q6PJI9 974 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 CHST9Q7L1S5 443 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 STRADAQ7RTN6 431 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 ADIPOR2Q86V24 386 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 RASSF3Q86WH2 238 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 CENPIQ92674 756 aaPredicted RBP17.92■□□□□ 0.46
MDC1-206ENST00000489540 LMLNQ96KR4 655 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 RPRD1AQ96P16 312 aaPredicted RBP17.92■□□□□ 0.46
MDC1-206ENST00000489540 ACOX2Q99424 681 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 SIK2Q9H0K1 926 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 PARVAQ9NVD7 372 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 KIAA1522Q9P206 1035 aaPredicted RBP17.92■□□□□ 0.46
MDC1-206ENST00000489540 STON1Q9Y6Q2 735 aa17.92■□□□□ 0.46
MDC1-206ENST00000489540 A0A1B0GVM2 712 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms