RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 FAM105AQ9NUU6 356 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 XPO7Q9UIA9 1087 aaKnown RBP8.75□□□□□ -1.01
VTI1A-207ENST00000489357 CDH9Q9ULB4 789 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 HES2Q9Y543 173 aa8.75□□□□□ -1.01
VTI1A-207ENST00000489357 SMIM23A6NLE4 172 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 H3BRJ5 948 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 H7C0C1 242 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 CYB561D2O14569 222 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 PTGESO14684 152 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 PPEF2O14830 753 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 AXIN1O15169 862 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 TM9SF1O15321 606 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 INPPL1O15357 1258 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 MTSS1O43312 755 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 LILRA1O75019 489 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 CYP11A1P05108 521 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 CD48P09326 243 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 FAM200BP0CF97 657 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 ZSCAN5DPP0CG00 497 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 PTPN1P18031 435 aaKnown RBP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 AKAP5P24588 427 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 L1CAMP32004 1257 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 GBP2P32456 591 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 HTR7P34969 479 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 SCTRP47872 440 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 ATP5OP48047 213 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 DYNLT1P63172 113 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 MRPS5P82675 430 aaKnown RBP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 HTRA4P83105 476 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 ATP11AP98196 1134 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 ZNF33AQ06730 810 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 SCAPQ12770 1279 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 SPARCL1Q14515 664 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 C15orf59Q2T9L4 293 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 GLRA4Q5JXX5 417 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 LGSNQ5TDP6 509 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 Q6ZNB5 142 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 UNC45BQ8IWX7 931 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 PALM2Q8IXS6 379 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 FUKQ8N0W3 1084 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 VPS52Q8N1B4 723 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 DEFB123Q8N688 67 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 PQLC3Q8N755 202 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 FAM71DQ8N9W8 422 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 PCDH19Q8TAB3 1148 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 SLC2A14Q8TDB8 520 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 ACSF2Q96CM8 615 aaPredicted RBP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 PGBD4Q96DM1 585 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 QKIQ96PU8 341 aaKnown RBP eCLIP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 SLC2A13Q96QE2 648 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 NPY6RQ99463 290 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 FAM118BQ9BPY3 351 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 NAT9Q9BTE0 207 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 FTHL17Q9BXU8 183 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 RC3H2Q9HBD1 1191 aaKnown RBP8.74□□□□□ -1.01
VTI1A-207ENST00000489357 POPDC2Q9HBU9 364 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 LRRC4Q9HBW1 653 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 RGS18Q9NS28 235 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 ZNF180Q9UJW8 692 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 ST3GAL5Q9UNP4 418 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 AP4E1Q9UPM8 1137 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 NME7Q9Y5B8 376 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 TEX264Q9Y6I9 313 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 SLC4A7Q9Y6M7 1214 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 SZT2Q5T011 3432 aa8.74□□□□□ -1.01
VTI1A-207ENST00000489357 MYO7AQ13402 2215 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 NLRC5Q86WI3 1866 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 IQANK1A0A1B0GTG1 560 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 GRXCR1A8MXD5 290 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 AP3B1O00203 1094 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 OPHN1O60890 802 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 SUN1O94901 812 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 GJB5O95377 273 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 FGFR1P11362 822 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 ODC1P11926 461 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 CYP2F1P24903 491 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 CNTFP26441 200 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 FDFT1P37268 417 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 MAGEA3P43357 314 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 RGS7P49802 495 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 GDF10P55107 478 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 BASP1P80723 227 aaKnown RBP8.73□□□□□ -1.01
VTI1A-207ENST00000489357 DEFB103AP81534 67 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 SOX4Q06945 474 aaPredicted RBP8.73□□□□□ -1.01
VTI1A-207ENST00000489357 NAB1Q13506 487 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 PDK1Q15118 436 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 CDO1Q16878 200 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 EML3Q32P44 896 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 RAB41Q5JT25 222 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 SPDYAQ5MJ70 313 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 ARMC3Q5W041 872 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 SCYL2Q6P3W7 929 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 C3orf62Q6ZUJ4 267 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 PIGZQ86VD9 579 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 HERC6Q8IVU3 1022 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 SRRM1Q8IYB3 904 aaKnown RBP8.73□□□□□ -1.01
VTI1A-207ENST00000489357 SIX6OS1Q8N1H7 587 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 MDM1Q8TC05 714 aa8.73□□□□□ -1.01
VTI1A-207ENST00000489357 RSPH1Q8WYR4 309 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms