RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TMEM225BP0DP42 221 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 ENGP17813 658 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 CYP2C18P33260 490 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 THBS4P35443 961 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 CCT8P50990 548 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 SOX10P56693 466 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 EEFSECP57772 596 aaKnown RBP4.8□□□□□ -1.64
XRN1-213ENST00000489241 DCAF7P61962 342 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 PDE1CQ14123 709 aaPredicted RBP4.8□□□□□ -1.64
XRN1-213ENST00000489241 KCNJ12Q14500 433 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 TOMM20Q15388 145 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 TBRG1Q3YBR2 411 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 SLC45A4Q5BKX6 768 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 AARS2Q5JTZ9 985 aaKnown RBP4.8□□□□□ -1.64
XRN1-213ENST00000489241 WDR45BQ5MNZ6 344 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 GRHL2Q6ISB3 625 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 ANO7Q6IWH7 933 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 C16orf54Q6UWD8 224 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 NEK10Q6ZWH5 1172 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 ZNF804AQ7Z570 1209 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 TDRD7Q8NHU6 1098 aaKnown RBP4.8□□□□□ -1.64
XRN1-213ENST00000489241 OVCA2Q8WZ82 227 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 REXO5Q96IC2 774 aaKnown RBP4.8□□□□□ -1.64
XRN1-213ENST00000489241 VPS50Q96JG6 964 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 C7orf26Q96N11 449 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 BARD1Q99728 777 aaKnown RBP4.8□□□□□ -1.64
XRN1-213ENST00000489241 DUSP22Q9NRW4 184 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 DLL3Q9NYJ7 618 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 HSF4Q9ULV5 492 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 GABRQQ9UN88 632 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 ST3GAL5Q9UNP4 418 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 RCE1Q9Y256 329 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 FRMD4BQ9Y2L6 1034 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 CYP46A1Q9Y6A2 500 aa4.8□□□□□ -1.64
XRN1-213ENST00000489241 SAC3D1A6NKF1 404 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 AP4M1O00189 453 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 CES2O00748 559 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 TJP3O95049 919 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 RTN3O95197 1032 aaPredicted RBP4.79□□□□□ -1.64
XRN1-213ENST00000489241 MYCLP12524 364 aaPredicted RBP4.79□□□□□ -1.64
XRN1-213ENST00000489241 ALADP13716 330 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 CPA1P15085 419 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 CCT4P50991 539 aaKnown RBP4.79□□□□□ -1.64
XRN1-213ENST00000489241 GALNT2Q10471 571 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 SEMA3BQ13214 749 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 BFSP2Q13515 415 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 KRT32Q14532 448 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 BAK1Q16611 211 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 ST3GAL2Q16842 350 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 AAK1Q2M2I8 961 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 LRRC24Q50LG9 513 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 PCID2Q5JVF3 399 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 AKNAD1Q5T1N1 836 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 SYNE3Q6ZMZ3 975 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 KRBA2Q6ZNG9 492 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 Q6ZWC4 215 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 ARHGEF25Q86VW2 580 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 GALNT4Q8N4A0 578 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 FAM71DQ8N9W8 422 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 ANKRD52Q8NB46 1076 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 LINS1Q8NG48 757 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 SLC2A12Q8TD20 617 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 TBC1D5Q92609 795 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 STAMQ92783 540 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 CTHRC1Q96CG8 243 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 RNF125Q96EQ8 232 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 EIF3CQ99613 913 aaKnown RBP4.79□□□□□ -1.64
XRN1-213ENST00000489241 HERC2P3Q9BVR0 1158 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 ARHGAP39Q9C0H5 1083 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 ACAD9Q9H845 621 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 IL21RQ9HBE5 538 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 KCNK9Q9NPC2 374 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 RXFP3Q9NSD7 469 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 FBXO28Q9NVF7 368 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 TMLHEQ9NVH6 421 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 CLIC5Q9NZA1 410 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 MGAT4CQ9UBM8 478 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 AMFRQ9UKV5 643 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 BAG5Q9UL15 447 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 RABGAP1Q9Y3P9 1069 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 ENTPD2Q9Y5L3 495 aa4.79□□□□□ -1.64
XRN1-213ENST00000489241 PGPEP1LA6NFU8 196 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 A8MVJ9 347 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 H0YIZ8 118 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 SPRY2O43597 315 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 USO1O60763 962 aaKnown RBP4.78□□□□□ -1.64
XRN1-213ENST00000489241 RBMXL2O75526 392 aaKnown RBP4.78□□□□□ -1.64
XRN1-213ENST00000489241 C1QL1O75973 258 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 GFPT2O94808 682 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 CSF1P09603 554 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 PEPDP12955 493 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 CREB1P16220 341 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 ABCD3P28288 659 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 MCM5P33992 734 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 DGKQP52824 942 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 RPL15P61313 204 aaKnown RBP4.78□□□□□ -1.64
XRN1-213ENST00000489241 RBM6P78332 1123 aaKnown RBP4.78□□□□□ -1.64
XRN1-213ENST00000489241 E2F1Q01094 437 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 PRKG2Q13237 762 aa4.78□□□□□ -1.64
XRN1-213ENST00000489241 TSTQ16762 297 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms