RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 PCMTD2Q9NV79 361 aa9.3□□□□□ -0.92
EXOSC1-211ENST00000489158 DDX43Q9NXZ2 648 aaKnown RBP9.3□□□□□ -0.92
EXOSC1-211ENST00000489158 ZNF212Q9UDV6 495 aa9.3□□□□□ -0.92
EXOSC1-211ENST00000489158 PRKAG2Q9UGJ0 569 aa9.3□□□□□ -0.92
EXOSC1-211ENST00000489158 PCDHB8Q9UN66 801 aa9.3□□□□□ -0.92
EXOSC1-211ENST00000489158 MTO1Q9Y2Z2 717 aaKnown RBP9.3□□□□□ -0.92
EXOSC1-211ENST00000489158 TRIM43BA6NCK2 446 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 DNAJC6O75061 913 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 CCDC130P13994 396 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 TCF4P15884 667 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ADORA2BP29275 332 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PGM1P36871 562 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 SERPINB4P48594 390 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 GATMP50440 423 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ARL4CP56559 192 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 TAP1Q03518 808 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ELAVL2Q12926 359 aaKnown RBP9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 RASA2Q15283 850 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 CYP4A22Q5TCH4 519 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 MFSD7Q6UXD7 560 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 TTC7BQ86TV6 843 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 OSTM1Q86WC4 334 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 WDTC1Q8N5D0 677 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 BANPQ8N9N5 519 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 B3GALNT2Q8NCR0 500 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 TRIM43Q96BQ3 446 aaPredicted RBP9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PAFAH2Q99487 392 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 LPIN3Q9BQK8 851 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 COLEC11Q9BWP8 271 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PPCSQ9HAB8 311 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 CDH9Q9ULB4 789 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PRG3Q9Y2Y8 225 aaPredicted RBP9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ALPK3Q96L96 1907 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 SYN3O14994 580 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 TM9SF1O15321 606 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 IFNB1P01574 187 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 KRT1P04264 644 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ITGB1P05556 798 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ZCCHC18P0CG32 403 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 CPA2P48052 419 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 NEK3P51956 506 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 BCAT1P54687 386 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PPIGQ13427 754 aaKnown RBP eCLIP9.29□□□□□ -0.929e-6■■□□□ 12.8
EXOSC1-211ENST00000489158 CUL3Q13618 768 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 LAMB3Q13751 1172 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 KRT72Q14CN4 511 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PDCD2Q16342 344 aaPredicted RBP9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PTPN20Q4JDL3 420 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 MSS51Q4VC12 460 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 FNBP1LQ5T0N5 605 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 CD300LGQ6UXG3 332 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 RCOR2Q8IZ40 523 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 THEM5Q8N1Q8 247 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PYROXD1Q8WU10 500 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 MZB1Q8WU39 189 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ABHD8Q96I13 439 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 SLITRK1Q96PX8 696 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ZNF184Q99676 751 aaPredicted RBP9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 HNRNPABQ99729 332 aaKnown RBP9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 VPS11Q9H270 941 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 IL23AQ9NPF7 189 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PARVAQ9NVD7 372 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 ARMCX1Q9P291 453 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 PDP2Q9P2J9 529 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 DNAJB4Q9UDY4 337 aa9.29□□□□□ -0.92
EXOSC1-211ENST00000489158 TBKBP1A7MCY6 615 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 F8W810 466 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 SGK1O00141 431 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 PIK3R2O00459 728 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 FCHO1O14526 889 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 B4GALT3O60512 393 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 DGKIO75912 1065 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 ALDH2P05091 517 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 CSF2RAP15509 400 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 EN2P19622 333 aaPredicted RBP9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 BGNP21810 368 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 PHBP35232 272 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 GPD2P43304 727 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 GABRB2P47870 512 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 ERFP50548 548 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 PLCB3Q01970 1234 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 MAPRE1Q15691 268 aaKnown RBP9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 HIF1AQ16665 826 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 PKDCCQ504Y2 493 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 ANKRD22Q5VYY1 191 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 PLEKHA7Q6IQ23 1121 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 DNAJC24Q6P3W2 148 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 DRICH1Q6PGQ1 229 aaPredicted RBP9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 DCUN1D2Q6PH85 259 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 C3orf62Q6ZUJ4 267 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 TAB3Q8N5C8 712 aaPredicted RBP9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 ANKRD52Q8NB46 1076 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 SLC2A14Q8TDB8 520 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 DCAKDQ8WVC6 231 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 TOP1MTQ969P6 601 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 VWCEQ96DN2 955 aa9.28□□□□□ -0.92
EXOSC1-211ENST00000489158 OXNAD1Q96HP4 312 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms