RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 PDZD4Q76G19 769 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-206ENST00000489131 NLRP14Q86W24 1093 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 MIB1Q86YT6 1006 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 LZTR1Q8N653 840 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 CCDC89Q8N998 374 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 MRPS31Q92665 395 aaKnown RBP13.24□□□□□ -0.29
TOP3A-206ENST00000489131 ZNF707Q96C28 371 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-206ENST00000489131 TBC1D31Q96DN5 1066 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 MRPL38Q96DV4 380 aaKnown RBP13.24□□□□□ -0.29
TOP3A-206ENST00000489131 PRKD2Q9BZL6 878 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 KLC2Q9H0B6 622 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 BRD8Q9H0E9 1235 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 RNF38Q9H0F5 515 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 CATSPERBQ9H7T0 1116 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 PCDH9Q9HC56 1237 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 FAM114A2Q9NRY5 505 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 XPO7Q9UIA9 1087 aaKnown RBP13.24□□□□□ -0.29
TOP3A-206ENST00000489131 TRANK1O15050 2925 aa13.24□□□□□ -0.29
TOP3A-206ENST00000489131 EPOPA6NHQ4 379 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 E9PAM4 449 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 GFRA2O00451 464 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 GREM1O60565 184 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 XYLBO75191 536 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 MOSPD3O75425 235 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 STC2O76061 302 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 RBP3P10745 1247 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 TCF3P15923 654 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 IVDP26440 423 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 EPHB2P29323 1055 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 ECHS1P30084 290 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 WEE1P30291 646 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 SERPINB6P35237 376 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 GUCY2DQ02846 1103 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 GBE1Q04446 702 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 SNX1Q13596 522 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 AUHQ13825 339 aaKnown RBP13.23□□□□□ -0.29
TOP3A-206ENST00000489131 PRKD1Q15139 912 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-206ENST00000489131 SLC45A4Q5BKX6 768 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 PRSS36Q5K4E3 855 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 ADGRD2Q7Z7M1 963 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 FAM217AQ8IXS0 508 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 KIAA1958Q8N8K9 716 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 RTL3Q8N8U3 475 aaKnown RBP13.23□□□□□ -0.29
TOP3A-206ENST00000489131 ADAMTS19Q8TE59 1207 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 ARNTL2Q8WYA1 636 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 FATE1Q969F0 183 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 TIFAQ96CG3 184 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 HAUS1Q96CS2 278 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 QKIQ96PU8 341 aaKnown RBP eCLIP13.23□□□□□ -0.29
TOP3A-206ENST00000489131 GCNAQ96QF7 691 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 USP29Q9HBJ7 922 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 EPB41L5Q9HCM4 733 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 ETNK2Q9NVF9 386 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 DZANK1Q9NVP4 752 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 LMCD1Q9NZU5 365 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 SAE1Q9UBE0 346 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-206ENST00000489131 ZNF212Q9UDV6 495 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 ZNF148Q9UQR1 794 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 DOCK4Q8N1I0 1966 aa13.23□□□□□ -0.29
TOP3A-206ENST00000489131 HELZP42694 1942 aaKnown RBP13.23□□□□□ -0.29
TOP3A-206ENST00000489131 NOTCH4Q99466 2003 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-206ENST00000489131 TMEM265A0A087WTH1 108 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 ZSCAN5CA6NGD5 496 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-206ENST00000489131 NDC80O14777 642 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 CCL16O15467 120 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 MFSD11O43934 449 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 ACSL4O60488 711 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 RFPL2O75678 378 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 RHOQP17081 205 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 SLC11A2P49281 568 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 HARS2P49590 506 aaKnown RBP13.22□□□□□ -0.29
TOP3A-206ENST00000489131 KCNQ1P51787 676 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 GALNT2Q10471 571 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 PDK1Q15118 436 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 FAM133BQ5BKY9 247 aaKnown RBP13.22□□□□□ -0.29
TOP3A-206ENST00000489131 NADSYN1Q6IA69 706 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 FBXO38Q6PIJ6 1188 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 NPNTQ6UXI9 565 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 C4orf22Q6V702 233 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 Q6ZNB5 142 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 LRRC49Q8IUZ0 686 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 CDKL3Q8IVW4 592 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-206ENST00000489131 UMODL1-AS1Q8N2C9 162 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 NPWQ8N729 165 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 GDPD5Q8WTR4 605 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 CASKIN2Q8WXE0 1202 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 PPP2R3CQ969Q6 453 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 HDAC11Q96DB2 347 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 TRIM51Q9BSJ1 452 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 NACA2Q9H009 215 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 TLE6Q9H808 572 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 SFXN1Q9H9B4 322 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 ARGLU1Q9NWB6 273 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-206ENST00000489131 TMEM248Q9NWD8 314 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 GRHL1Q9NZI5 618 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 WHRNQ9P202 907 aa13.22□□□□□ -0.29
TOP3A-206ENST00000489131 DNMT3BQ9UBC3 853 aaKnown RBP13.22□□□□□ -0.29
TOP3A-206ENST00000489131 ARHGAP26Q9UNA1 814 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms