RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 MAP3K6O95382 1288 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 KRT14P02533 472 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 F11P03951 625 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 CKMP06732 381 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 IRF1P10914 325 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 MX2P20592 715 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 BMP8BP34820 402 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 ACTN2P35609 894 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 ADCY8P40145 1251 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 TNNT3P45378 269 aaPredicted RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 VPS41P49754 854 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 KCNQ1P51787 676 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 CYP4F8P98187 520 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 XRCC4Q13426 336 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 PAFAH1B3Q15102 231 aaKnown RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 PDK1Q15118 436 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 TRIP13Q15645 432 aaPredicted RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 ARHGAP15Q53QZ3 475 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 SLC45A4Q5BKX6 768 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 MS4A13Q5J8X5 152 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 PIK3R6Q5UE93 754 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 MANEALQ5VSG8 457 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 RAP1GAP2Q684P5 730 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 CCNI2Q6ZMN8 369 aaPredicted RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 RBM23Q86U06 439 aaKnown RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 TMC8Q8IU68 726 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 GSPT2Q8IYD1 628 aaKnown RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 HS6ST3Q8IZP7 471 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 EIF1ADQ8N9N8 165 aaKnown RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 FAM71DQ8N9W8 422 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 TFB1MQ8WVM0 346 aaKnown RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.33□□□□□ -0.761e-6■■■■■ 56.2
USP11-211ENST00000489111 TIFAQ96CG3 184 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 SNF8Q96H20 258 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 C1orf74Q96LT6 269 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 FAM129AQ9BZQ8 928 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 PCDH9Q9HC56 1237 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 ETNK2Q9NVF9 386 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 SMPD4Q9NXE4 827 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 ZDHHC7Q9NXF8 308 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 DONSONQ9NYP3 566 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 DTLQ9NZJ0 730 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 XPO7Q9UIA9 1087 aaKnown RBP10.33□□□□□ -0.76
USP11-211ENST00000489111 NFU1Q9UMS0 254 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 SNX24Q9Y343 169 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 MYH10P35580 1976 aa10.33□□□□□ -0.76
USP11-211ENST00000489111 PLXNA3P51805 1871 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 A0A1W2PRU2 124 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 BCLAF3A2AJT9 711 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 F5H5T6 163 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 NCAM2O15394 837 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 KCNN4O15554 427 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 ACSL4O60488 711 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 STC2O76061 302 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 POU2F2P09086 479 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 PTPN2P17706 415 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 PFKLP17858 780 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 HDCP19113 662 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 DDX6P26196 483 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP11-211ENST00000489111 CORO1AP31146 461 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 HOXC13P31276 330 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 STIP1P31948 543 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 RPL21P46778 160 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 NRIP1P48552 1158 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 CARSP49589 748 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 CLCN6P51797 869 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 DRG2P55039 364 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 MLLT6P55198 1093 aaPredicted RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 SMAD3P84022 425 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 AUHQ13825 339 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 RABGAP1LQ5R372 815 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 TXNDC8Q6A555 127 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 EMBQ6PCB8 327 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 GAREM2Q75VX8 874 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 ADGRD2Q7Z7M1 963 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 DDX42Q86XP3 938 aaKnown RBP eCLIP10.32□□□□□ -0.76
USP11-211ENST00000489111 LZTR1Q8N653 840 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 BBOF1Q8ND07 529 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 CCNYQ8ND76 341 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 HNRNPLLQ8WVV9 542 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 SEC14L1Q92503 715 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 LRRC45Q96CN5 670 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 RPRD1AQ96P16 312 aaPredicted RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 OLFM3Q96PB7 478 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 CDCA3Q99618 268 aaPredicted RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 DDX50Q9BQ39 737 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 KLF16Q9BXK1 252 aaPredicted RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 ZYG11BQ9C0D3 744 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 BRD8Q9H0E9 1235 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 DZANK1Q9NVP4 752 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 LSM7Q9UK45 103 aaKnown RBP10.32□□□□□ -0.76
USP11-211ENST00000489111 VANGL2Q9ULK5 521 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 MFHAS1Q9Y4C4 1052 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 HCFC2Q9Y5Z7 792 aa10.32□□□□□ -0.76
USP11-211ENST00000489111 BHMG1C9JSJ3 638 aaPredicted RBP10.31□□□□□ -0.76
USP11-211ENST00000489111 LATS1O95835 1130 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 RHOP08100 348 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 MYBL2P10244 700 aa10.31□□□□□ -0.76
USP11-211ENST00000489111 RHOQP17081 205 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms