RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 PIWIL1Q96J94 861 aaKnown RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 SIX2Q9NPC8 291 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 NLRC4Q9NPP4 1024 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 TMEM51Q9NW97 253 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 THAP10Q9P2Z0 257 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-232ENST00000489053 CYTH4Q9UIA0 394 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 STOML2Q9UJZ1 356 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 FBXO10Q9UK96 956 aa9.46□□□□□ -0.9
HDAC6-232ENST00000489053 BCLAF3A2AJT9 711 aaKnown RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 ANTXRLA6NF34 631 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 KCNU1A8MYU2 1149 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 WASH3PC4AMC7 463 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 GOLGA8SH3BPF8 625 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 M0QYT0 321 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 DAB1O75553 588 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 IGLV3-27P01718 113 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 ASLP04424 464 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 DLDP09622 509 aaKnown RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 GNSP15586 552 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 NDUFV2P19404 249 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 TACR2P21452 398 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 BCKDHBP21953 392 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 OXTRP30559 389 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 CLCN1P35523 988 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 IL12RB1P42701 662 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 NSFP46459 744 aaKnown RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 RPL34P49207 117 aaKnown RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 SULT1E1P49888 294 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 LMAN2Q12907 356 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 FUT11Q495W5 492 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 ANO6Q4KMQ2 910 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 MS4A13Q5J8X5 152 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 SPDYCQ5MJ68 293 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 WDR45BQ5MNZ6 344 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 LRRC31Q6UY01 552 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 TRIM72Q6ZMU5 477 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 RBM43Q6ZSC3 357 aaKnown RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 OLIG1Q8TAK6 271 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 CYB5D2Q8WUJ1 264 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 SORCS1Q8WY21 1168 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 FOXJ1Q92949 421 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 FCRL2Q96LA5 508 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 RPRD1AQ96P16 312 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 EDEM2Q9BV94 578 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 NUCKS1Q9H1E3 243 aaKnown RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 FBRSQ9HAH7 460 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 SUN2Q9UH99 717 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 AJAP1Q9UKB5 411 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-232ENST00000489053 CACNA1AO00555 2505 aa9.45□□□□□ -0.9
HDAC6-232ENST00000489053 NCOR2Q9Y618 2525 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-232ENST00000489053 A0A1W2PQF6 199 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 FAM170AA1A519 330 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 LGALS16A8MUM7 142 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 GABBR2O75899 941 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 LUC7L3O95232 432 aaKnown RBP9.44□□□□□ -0.9
HDAC6-232ENST00000489053 F9P00740 461 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 DNTTP04053 509 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 ERBB2P04626 1255 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 CD6P30203 668 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 HLA-FP30511 346 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SLC6A4P31645 630 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 NOS2P35228 1153 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SOX5P35711 763 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 MATKP42679 507 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 RPS24P62847 133 aaKnown RBP9.44□□□□□ -0.9
HDAC6-232ENST00000489053 DEUP1Q05D60 604 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 GFPT1Q06210 699 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-232ENST00000489053 KCNMA1Q12791 1236 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 ZNF177Q13360 481 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-232ENST00000489053 TAF5Q15542 800 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 MAP7D1Q3KQU3 841 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 PTPN20Q4JDL3 420 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 FAM133BQ5BKY9 247 aaKnown RBP9.44□□□□□ -0.9
HDAC6-232ENST00000489053 DAB2IPQ5VWQ8 1189 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 NAA35Q5VZE5 725 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 KIAA1211LQ6NV74 962 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 OLFML1Q6UWY5 402 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SLC26A9Q7LBE3 791 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 TMPRSS6Q8IU80 811 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SYT12Q8IV01 421 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 CFAP52Q8N1V2 620 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 DEFB119Q8N690 84 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 OR2T3Q8NH03 318 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 FIBINQ8TAL6 211 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 CEP76Q8TAP6 659 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 CPA5Q8WXQ8 436 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SNX19Q92543 992 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 MRGPRX1Q96LB2 322 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 HSPA12BQ96MM6 686 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SLC2A13Q96QE2 648 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SIK2Q9H0K1 926 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 MUC3BQ9H195 1237 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SMOC1Q9H4F8 434 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 WDCPQ9H6R7 721 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 TMEM9BQ9NQ34 198 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 KIAA1522Q9P206 1035 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-232ENST00000489053 SUSD2Q9UGT4 822 aa9.44□□□□□ -0.9
HDAC6-232ENST00000489053 CLEC4EQ9ULY5 219 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms