RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ZNF366Q8N895 744 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 ZNF557Q8N988 423 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 C1orf131Q8NDD1 294 aaKnown RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 PRCCQ92733 491 aaPredicted RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 TOE1Q96GM8 510 aaKnown RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 PPP1R13BQ96KQ4 1090 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 TMEM245Q9H330 911 aa23.86■■□□□ 1.41
COL9A3-213ENST00000489045 XPO7Q9UIA9 1087 aaKnown RBP23.86■■□□□ 1.41
COL9A3-213ENST00000489045 KCNJ18B7U540 433 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 DLDP09622 509 aaKnown RBP23.85■■□□□ 1.41
COL9A3-213ENST00000489045 POLR2EP19388 210 aaKnown RBP23.85■■□□□ 1.41
COL9A3-213ENST00000489045 CLCN1P35523 988 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 MAPK8P45983 427 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 TPMTP51580 245 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 CAMK2GQ13555 558 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-213ENST00000489045 KCNJ12Q14500 433 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 ZC3H12AQ5D1E8 599 aaKnown RBP23.85■■□□□ 1.41
COL9A3-213ENST00000489045 DPY19L2P1Q6NXN4 242 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 SLC47A2Q86VL8 602 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 CARNMT1Q8N4J0 409 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 OR2T3Q8NH03 318 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 FIBINQ8TAL6 211 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 CEP76Q8TAP6 659 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 ZNF419Q96HQ0 510 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-213ENST00000489045 LMLNQ96KR4 655 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 LHX5Q9H2C1 402 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 FSCN3Q9NQT6 498 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 SAMSN1Q9NSI8 373 aaKnown RBP23.85■■□□□ 1.41
COL9A3-213ENST00000489045 WSB2Q9NYS7 404 aaPredicted RBP23.85■■□□□ 1.41
COL9A3-213ENST00000489045 SLC6A14Q9UN76 642 aa23.85■■□□□ 1.41
COL9A3-213ENST00000489045 PES1O00541 588 aaKnown RBP23.84■■□□□ 1.41
COL9A3-213ENST00000489045 ATP5BP06576 529 aaKnown RBP23.84■■□□□ 1.41
COL9A3-213ENST00000489045 SERPINF2P08697 491 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 ACADMP11310 421 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 KRT9P35527 623 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 UAP1L1Q3KQV9 507 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 DCAF6Q58WW2 860 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 N4BP2L1Q5TBK1 243 aaPredicted RBP23.84■■□□□ 1.41
COL9A3-213ENST00000489045 RAP1GAP2Q684P5 730 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 PSAPL1Q6NUJ1 521 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 RABEPKQ7Z6M1 372 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 CHSY1Q86X52 802 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 RGL4Q8IZJ4 473 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 DEFB106AQ8N104 65 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 CFAP52Q8N1V2 620 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 FOXJ1Q92949 421 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 NOX5Q96PH1 765 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 FAM204AQ9H8W3 233 aa23.84■■□□□ 1.41
COL9A3-213ENST00000489045 CACNA1EQ15878 2313 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 TPRP12270 2363 aaKnown RBP23.83■■□□□ 1.41
COL9A3-213ENST00000489045 GLI1P08151 1106 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 KCNMA1Q12791 1236 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 CDH18Q13634 790 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 RAPGEF1Q13905 1077 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 EFHC1Q5JVL4 640 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 SYCP2LQ5T4T6 812 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 FAM183BPQ6ZVS7 135 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 FAM71AQ8IYT1 594 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 LGI2Q8N0V4 545 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 BTN2A3PQ96KV6 586 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 SLC2A13Q96QE2 648 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 GPR174Q9BXC1 333 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 CAPN10Q9HC96 672 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 PLCB1Q9NQ66 1216 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 ASNSD1Q9NWL6 643 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 FHOD1Q9Y613 1164 aa23.83■■□□□ 1.41
COL9A3-213ENST00000489045 CHD8Q9HCK8 2581 aa23.83■■□□□ 1.4
COL9A3-213ENST00000489045 NUMA1Q14980 2115 aa23.83■■□□□ 1.4
COL9A3-213ENST00000489045 ACACBO00763 2458 aa23.83■■□□□ 1.4
COL9A3-213ENST00000489045 HSF2BPO75031 334 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 GRAP2O75791 330 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 LUC7L3O95232 432 aaKnown RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 IGLV3-19P01714 112 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 ERBB2P04626 1255 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 TACR2P21452 398 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 OXTRP30559 389 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 NOVA1P51513 510 aaKnown RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 CDK17Q00537 523 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 GFPT1Q06210 699 aaPredicted RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 EIF4EBP2Q13542 120 aaPredicted RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 PTPN20Q4JDL3 420 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 TCP11X2Q5H9J9 407 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 FSCBQ5H9T9 825 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 CT47A1Q5JQC4 288 aaPredicted RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 OR6B2Q6IFH4 312 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 C11orf57Q6ZUT1 292 aaPredicted RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 CCDC117Q8IWD4 279 aaPredicted RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 ATP6V0D2Q8N8Y2 350 aa23.82■■□□□ 1.4
COL9A3-213ENST00000489045 GTPBP2Q9BX10 602 aaKnown RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 INTS6Q9UL03 887 aaKnown RBP23.82■■□□□ 1.4
COL9A3-213ENST00000489045 SYNJ2BP-COX16A0A087WUM0 186 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 MEI4A8MW99 385 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 GIPC1O14908 333 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 MAOBP27338 520 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 CSKP41240 450 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 DRAP1Q14919 205 aaPredicted RBP23.81■■□□□ 1.4
COL9A3-213ENST00000489045 WDR45BQ5MNZ6 344 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 SH3PXD2AQ5TCZ1 1133 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 OLFML1Q6UWY5 402 aa23.81■■□□□ 1.4
COL9A3-213ENST00000489045 MMS22LQ6ZRQ5 1243 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms