RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 INTS13Q9NVM9 706 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 GDAP2Q9NXN4 497 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 EHD2Q9NZN4 543 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 EPS15L1Q9UBC2 864 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 MUTYHQ9UIF7 546 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 NUDT5Q9UKK9 219 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 CDH7Q9ULB5 785 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 AGAP1Q9UPQ3 857 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 ASB3Q9Y575 518 aa5.46□□□□□ -1.54
SF3A3-207ENST00000488934 NUP210Q8TEM1 1887 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 PTPRDP23468 1912 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 DENND4CQ5VZ89 1909 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 BICDL2A1A5D9 508 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 MTMR11A4FU01 709 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 GOLGA6L22H0YM25 854 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 PPEF2O14830 753 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 CETN3O15182 167 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 CLIC2O15247 247 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 CCL16O15467 120 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 ADAM12O43184 909 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 WEE2P0C1S8 567 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 EPB41P11171 864 aaKnown RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 SP100P23497 879 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 HOXD13P35453 343 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 PSMC2P35998 433 aaKnown RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 VAMP7P51809 220 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 GUCY2FP51841 1108 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 TWF1Q12792 350 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 BIRC3Q13489 604 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 TDGQ13569 410 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 KIR3DS1Q14943 382 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 TAF12Q16514 161 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 PLEKHN1Q494U1 663 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 SLC39A12Q504Y0 691 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 ARHGAP15Q53QZ3 475 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 RPTNQ6XPR3 784 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 C4orf50Q6ZRC1 276 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 TRAPPC11Q7Z392 1133 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 GRASPQ7Z6J2 395 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 SUGP1Q8IWZ8 645 aaKnown RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 ADGRF2Q8IZF7 708 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 LZTR1Q8N653 840 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 TRIML1Q8N9V2 468 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 ENGASEQ8NFI3 743 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 SPATA20Q8TB22 786 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 PARD3BQ8TEW8 1205 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 MZB1Q8WU39 189 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 CCDC127Q96BQ5 260 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 ZNF707Q96C28 371 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 FUBP3Q96I24 572 aaKnown RBP eCLIP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 CHAMP1Q96JM3 812 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 CEP295NLQ96MC4 621 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 GBP4Q96PP9 640 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 MMS19Q96T76 1030 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 PRRX2Q99811 253 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 GPR88Q9GZN0 384 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 ZCWPW1Q9H0M4 648 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 KCNH6Q9H252 994 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 FAM124BQ9H5Z6 455 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 CNTD2Q9H8S5 307 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 DMAC2Q9NW81 257 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 GDE1Q9NZC3 331 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 UXTQ9UBK9 157 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 CDH9Q9ULB4 789 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 DUSP12Q9UNI6 340 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 EMC9Q9Y3B6 208 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 MRPS23Q9Y3D9 190 aaKnown RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 YIPF1Q9Y548 306 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 TIMM13Q9Y5L4 95 aaPredicted RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 SNX9Q9Y5X1 595 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 MYH10P35580 1976 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 ZNF638Q14966 1978 aaKnown RBP5.45□□□□□ -1.54
SF3A3-207ENST00000488934 DOCK6Q96HP0 2047 aa5.45□□□□□ -1.54
SF3A3-207ENST00000488934 C5orf42Q9H799 3197 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 LRRIQ3A6PVS8 624 aaPredicted RBP5.44□□□□□ -1.54
SF3A3-207ENST00000488934 AGRPO00253 132 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 SLC16A3O15427 465 aaKnown RBP5.44□□□□□ -1.54
SF3A3-207ENST00000488934 NPHS1O60500 1241 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 OBSL1O75147 1896 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 TACC1O75410 805 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 KCNH1O95259 989 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 FGFR1OPO95684 399 aaKnown RBP5.44□□□□□ -1.54
SF3A3-207ENST00000488934 RHOP08100 348 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 DBHP09172 617 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 CSH1P0DML2 217 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 CSH2P0DML3 217 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 LAMP2P13473 410 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 CDC25CP30307 473 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 GTF2H1P32780 548 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 PIK3CAP42336 1068 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 EPHA5P54756 1037 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 RPL10AP62906 217 aaKnown RBP5.44□□□□□ -1.54
SF3A3-207ENST00000488934 ZXDAP98168 799 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 FKBP3Q00688 224 aaKnown RBP5.44□□□□□ -1.54
SF3A3-207ENST00000488934 PFKPQ01813 784 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 ADAM9Q13443 819 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 PNOCQ13519 176 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 SOWAHAQ2M3V2 549 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 SGSM1Q2NKQ1 1148 aa5.44□□□□□ -1.54
SF3A3-207ENST00000488934 ZNF699Q32M78 642 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms