RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CNNM4Q6P4Q7 775 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 STXBP4Q6ZWJ1 553 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 RTL10Q7L3V2 364 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 WDR49Q8IV35 697 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 DCP1BQ8IZD4 617 aaKnown RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 ARHGEF39Q8N4T4 335 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 LRRC52Q8N7C0 313 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 MAB21L3Q8N8X9 362 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 XXYLT1Q8NBI6 393 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 SPPL2BQ8TCT7 592 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 EEF2KMTQ96G04 330 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 MAP6Q96JE9 813 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 FCRL3Q96P31 734 aaPredicted RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 FNBP1Q96RU3 617 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 SLC22A12Q96S37 553 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 TSPAN18Q96SJ8 248 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 CYP2S1Q96SQ9 504 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 PRRX2Q99811 253 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 SYT15Q9BQS2 421 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 DDX23Q9BUQ8 820 aaKnown RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 TRMT61BQ9BVS5 477 aaKnown RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 CDADC1Q9BWV3 514 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 SDCBP2Q9H190 292 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 SMYD3Q9H7B4 428 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 TRPC7Q9HCX4 862 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 EXOC1Q9NV70 894 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
CDHR3-213ENST00000488386 C2orf42Q9NWW7 574 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 PIAS3Q9Y6X2 628 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 GREB1Q4ZG55 1949 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 ANAPC1Q9H1A4 1944 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 ATG2BQ96BY7 2078 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 CACNA1IQ9P0X4 2223 aa6.3□□□□□ -1.4
CDHR3-213ENST00000488386 UBE4BO95155 1302 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 PVALEFA0A1B0GWK0 134 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 C2orf78A6NCI8 922 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 ANTXRLA6NF34 631 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 ARNTLO00327 626 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 GABRDO14764 452 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 PPM1BO75688 479 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 VNN1O95497 513 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 GSTM1P09488 218 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 SP9P0CG40 484 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 TRIM49P0CI25 452 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 TRIM49CP0CI26 452 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 ARSAP15289 507 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 CMA1P23946 247 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 NBL1P41271 181 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 TUFMP49411 452 aaKnown RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 PFKPQ01813 784 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 POU5F1Q01860 360 aaKnown RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 CSTF1Q05048 431 aaKnown RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 MTAPQ13126 283 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 BIRC3Q13489 604 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 PNOCQ13519 176 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 VEPH1Q14D04 833 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 PSMD6Q15008 389 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 PON2Q15165 354 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 BMT2Q1RMZ1 405 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 DPY19L1Q2PZI1 675 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 WDR72Q3MJ13 1102 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 ARHGAP15Q53QZ3 475 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 Q6ZS52 159 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 ITIH5Q86UX2 942 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 SPATA2LQ8IUW3 424 aaPredicted RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 C1orf210Q8IVY1 113 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 MFSD6LQ8IWD5 586 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 YAF2Q8IY57 180 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 DCLK2Q8N568 766 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 LEMD2Q8NC56 503 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 TMEM52Q8NDY8 209 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 OR6B3Q8NGW1 331 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 FAM3CQ92520 227 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 PCED1BQ96HM7 432 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 ACBD6Q9BR61 282 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF518BQ9C0D4 1074 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 KCTD10Q9H3F6 313 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 EBF3Q9H4W6 596 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 TASP1Q9H6P5 420 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 LMAN1LQ9HAT1 526 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 MAGEF1Q9HAY2 307 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 TMEM30AQ9NV96 361 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 GDAP2Q9NXN4 497 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 HMGXB4Q9UGU5 601 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 MAFFQ9ULX9 164 aa6.29□□□□□ -1.4
CDHR3-213ENST00000488386 GPR55Q9Y2T6 319 aaPredicted RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 R3HCC1Q9Y3T6 440 aaKnown RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.29□□□□□ -1.4
CDHR3-213ENST00000488386 VPS13AQ96RL7 3174 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 OTOL1A6NHN0 477 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 A8MXQ7 604 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 KIAA0391O15091 583 aaKnown RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 ZNF202O95125 648 aa6.28□□□□□ -1.4
CDHR3-213ENST00000488386 C4BPAP04003 597 aaKnown RBP6.28□□□□□ -1.4
CDHR3-213ENST00000488386 NR3C1P04150 777 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms