RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SMOC1Q9H4F8 434 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 DAAM1Q9Y4D1 1078 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 PCDHGA5Q9Y5G8 931 aa24.58■■□□□ 1.53
RNF38-208ENST00000488058 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 SMTNL1A8MU46 457 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 GOLGA8SH3BPF8 625 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 M0QYT0 321 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 TIMM44O43615 452 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 SYNCRIPO60506 623 aaKnown RBP24.57■■□□□ 1.52
RNF38-208ENST00000488058 PRKCHP24723 683 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 CCR1P32246 355 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 NOS2P35228 1153 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 CDH18Q13634 790 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 SF3A2Q15428 464 aaKnown RBP24.57■■□□□ 1.52
RNF38-208ENST00000488058 MAP7D1Q3KQU3 841 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 MBLAC2Q68D91 279 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 ARMCX6Q7L4S7 300 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 LPCAT2Q7L5N7 544 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 TMEFF1Q8IYR6 380 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 ZNF557Q8N988 423 aaPredicted RBP24.57■■□□□ 1.52
RNF38-208ENST00000488058 C12orf50Q8NA57 414 aaPredicted RBP24.57■■□□□ 1.52
RNF38-208ENST00000488058 ZNF397Q8NF99 534 aaPredicted RBP24.57■■□□□ 1.52
RNF38-208ENST00000488058 CD248Q9HCU0 757 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 MBD1Q9UIS9 605 aaPredicted RBP24.57■■□□□ 1.52
RNF38-208ENST00000488058 NOCTQ9UK39 431 aaKnown RBP24.57■■□□□ 1.52
RNF38-208ENST00000488058 CDV3Q9UKY7 258 aaKnown RBP24.57■■□□□ 1.52
RNF38-208ENST00000488058 PLXND1Q9Y4D7 1925 aa24.57■■□□□ 1.52
RNF38-208ENST00000488058 KCNU1A8MYU2 1149 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 PRR5-ARHGAP8B1AHC4 643 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 F5H5T6 163 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 EPHX1P07099 455 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 SLC2A3P11169 496 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 MATKP42679 507 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 SULT1E1P49888 294 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 NOMO3P69849 1222 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 ARHGAP8P85298 464 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 FUT11Q495W5 492 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 AASDHQ4L235 1098 aaPredicted RBP24.56■■□□□ 1.52
RNF38-208ENST00000488058 APTXQ7Z2E3 356 aaKnown RBP24.56■■□□□ 1.52
RNF38-208ENST00000488058 ADIPOR2Q86V24 386 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 ZNF677Q86XU0 584 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 XYLT1Q86Y38 959 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.56■■□□□ 1.52
RNF38-208ENST00000488058 BPIFA3Q9BQP9 254 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.56■■□□□ 1.52
RNF38-208ENST00000488058 CYP8B1Q9UNU6 501 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 PLA2G4CQ9UP65 541 aa24.56■■□□□ 1.52
RNF38-208ENST00000488058 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.55■■□□□ 1.52
RNF38-208ENST00000488058 LRRC10BA6NIK2 292 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 H0Y626 953 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 HLA-EP13747 358 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 POLR2EP19388 210 aaKnown RBP24.55■■□□□ 1.52
RNF38-208ENST00000488058 GABRB2P47870 512 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 CDR2Q01850 454 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 LMAN2Q12907 356 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 EIF4EBP2Q13542 120 aaPredicted RBP24.55■■□□□ 1.52
RNF38-208ENST00000488058 ENPP2Q13822 863 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 CYP2U1Q7Z449 544 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 CACUL1Q86Y37 369 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 DHX40Q8IX18 779 aaKnown RBP24.55■■□□□ 1.52
RNF38-208ENST00000488058 ZNF366Q8N895 744 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 FIBINQ8TAL6 211 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 MRGPRX1Q96LB2 322 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 ERGIC2Q96RQ1 377 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 STAP1Q9ULZ2 295 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 ZNF292O60281 2723 aa24.55■■□□□ 1.52
RNF38-208ENST00000488058 NUP205Q92621 2012 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 BCLAF3A2AJT9 711 aaKnown RBP24.54■■□□□ 1.52
RNF38-208ENST00000488058 ZNF217O75362 1048 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 LUC7L3O95232 432 aaKnown RBP24.54■■□□□ 1.52
RNF38-208ENST00000488058 ATP5BP06576 529 aaKnown RBP24.54■■□□□ 1.52
RNF38-208ENST00000488058 ZNF806P0C7X5 589 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 ZNF165P49910 485 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 FMO1Q01740 532 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 RNF43Q68DV7 783 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 KIAA0907Q7Z7F0 614 aaPredicted RBP24.54■■□□□ 1.52
RNF38-208ENST00000488058 DEFB119Q8N690 84 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 PRDM16Q9HAZ2 1276 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 CD93Q9NPY3 652 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 VPS45Q9NRW7 570 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 RRN3Q9NYV6 651 aa24.54■■□□□ 1.52
RNF38-208ENST00000488058 MUC22E2RYF6 1773 aaPredicted RBP24.53■■□□□ 1.52
RNF38-208ENST00000488058 SYCE3A1L190 88 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 GDF9O60383 454 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 FOXD2O60548 495 aaPredicted RBP24.53■■□□□ 1.52
RNF38-208ENST00000488058 CAVIN2O95810 425 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 CHRNB2P17787 502 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 RPL6Q02878 288 aaKnown RBP24.53■■□□□ 1.52
RNF38-208ENST00000488058 PUM1Q14671 1186 aaKnown RBP eCLIP24.53■■□□□ 1.52
RNF38-208ENST00000488058 PLA2G2CQ5R387 149 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 SLC36A4Q6YBV0 504 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 MMS22LQ6ZRQ5 1243 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 CIR1Q86X95 450 aaPredicted RBP24.53■■□□□ 1.52
RNF38-208ENST00000488058 PIGKQ92643 395 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 NPY6RQ99463 290 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 SEPT11Q9NVA2 429 aaKnown RBP24.53■■□□□ 1.52
RNF38-208ENST00000488058 CEP192Q8TEP8 1941 aa24.53■■□□□ 1.52
RNF38-208ENST00000488058 CKAP5Q14008 2032 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 IGHV1OR15-9A0A0B4J2B8 117 aa24.52■■□□□ 1.52
RNF38-208ENST00000488058 TEX33O43247 280 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms