RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 USP29Q9HBJ7 922 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 SUN2Q9UH99 717 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 TUBD1Q9UJT1 453 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 SCML1Q9UN30 329 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 PCDHB11Q9Y5F2 797 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 FBN3Q75N90 2809 aa12.76□□□□□ -0.37
ATPAF1-205ENST00000487193 PP2D1A8MPX8 630 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 K7ESM1 405 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 KLKB1P03952 638 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 CYBBP04839 570 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 CHKAP35790 457 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 PLA2G4AP47712 749 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 TRAPPC10P48553 1259 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 HARS2P49590 506 aaKnown RBP12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 DRAP1Q14919 205 aaPredicted RBP12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 CHST9Q7L1S5 443 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 PRPF39Q86UA1 669 aaKnown RBP12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 IQCHQ86VS3 1027 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 KCNB2Q92953 911 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 KLHDC7BQ96G42 594 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 MRPL45Q9BRJ2 306 aaKnown RBP12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 IKZF4Q9H2S9 585 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 EPB41L5Q9HCM4 733 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 TLR8Q9NR97 1041 aaKnown RBP12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 ITGA11Q9UKX5 1188 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 R3HCC1Q9Y3T6 440 aaKnown RBP12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 NME7Q9Y5B8 376 aa12.75□□□□□ -0.37
ATPAF1-205ENST00000487193 RNASEH1O60930 286 aaKnown RBP12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 TCEA3O75764 348 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 PIAS2O75928 621 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 STC2O76061 302 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 HMBSP08397 361 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 PSMA5P28066 241 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 PDX1P52945 283 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 KCNMA1Q12791 1236 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 CST6Q15828 149 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 ZNF542PQ5EBM4 170 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 PERM1Q5SV97 790 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 SLFN12LQ6IEE8 588 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 RAB11FIP2Q7L804 512 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 HEATR4Q86WZ0 1026 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 MMAAQ8IVH4 418 aaKnown RBP12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 MYCT1Q8N699 235 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 OR6B3Q8NGW1 331 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 TPCN2Q8NHX9 752 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 JPH3Q8WXH2 748 aaPredicted RBP12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 HPDLQ96IR7 371 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 PLIN2Q99541 437 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 MED10Q9BTT4 135 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 SLC12A9Q9BXP2 914 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 OSER1Q9NX31 292 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 IL37Q9NZH6 218 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 ARHGAP20Q9P2F6 1191 aa12.74□□□□□ -0.37
ATPAF1-205ENST00000487193 ADGRG4Q8IZF6 3080 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 NEMP2A6NFY4 417 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 SCAMP1O15126 338 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 DIAPH2O60879 1101 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 SLC8A1P32418 973 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 ADPRHP54922 357 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 OVGP1Q12889 678 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 KRT79Q5XKE5 535 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 SND1Q7KZF4 910 aaKnown RBP eCLIP12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 RUFY3Q7L099 469 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 LIMS2Q7Z4I7 341 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 DSG4Q86SJ6 1040 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 FAM114A1Q8IWE2 563 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 ZSWIM2Q8NEG5 633 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 POMGNT1Q8WZA1 660 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 WASF1Q92558 559 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 FAM213AQ9BRX8 229 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 DUSP23Q9BVJ7 150 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 SLC2A11Q9BYW1 496 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 CASS4Q9NQ75 786 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 KLHL11Q9NVR0 708 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 CUEDC1Q9NWM3 386 aaPredicted RBP12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 PISDQ9UG56 409 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 ACSL6Q9UKU0 697 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 ZNF510Q9Y2H8 683 aa12.73□□□□□ -0.37
ATPAF1-205ENST00000487193 C10orf142B7Z368 130 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 MUSKO15146 869 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 LATO43561 262 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 SIN3BO75182 1162 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 DDAH2O95865 285 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 HLA-FP30511 346 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 KLRB1Q12918 225 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 SPIDRQ14159 915 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 C10orf120Q5SQS8 335 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 RSRC2Q7L4I2 434 aaKnown RBP12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 B3GNT8Q7Z7M8 397 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 ZC3H3Q8IXZ2 948 aaKnown RBP12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 SYT2Q8N9I0 419 aaPredicted RBP12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 ABHD17AQ96GS6 310 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 MYOCQ99972 504 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 MTMR12Q9C0I1 747 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 DONSONQ9NYP3 566 aa12.72□□□□□ -0.37
ATPAF1-205ENST00000487193 DKK3Q9UBP4 350 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms