RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TLR6Q9Y2C9 796 aa25.49■■□□□ 1.67
LIME1-206ENST00000487026 CACNA1EQ15878 2313 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 SPAARA0A1B0GVQ0 90 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 E5RJQ4 531 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 CAPN9O14815 690 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 IRAK2O43187 625 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 PAPSS1O43252 624 aaPredicted RBP25.48■■□□□ 1.67
LIME1-206ENST00000487026 MED7O43513 233 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 MOCS2O96007 188 aaPredicted RBP25.48■■□□□ 1.67
LIME1-206ENST00000487026 DLDP09622 509 aaKnown RBP25.48■■□□□ 1.67
LIME1-206ENST00000487026 GNA15P30679 374 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 UBE2HP62256 183 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 TRIM65Q6PJ69 517 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 TAC4Q86UU9 113 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 IRF2BP1Q8IU81 584 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 CFAP52Q8N1V2 620 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 ZCCHC9Q8N567 271 aaKnown RBP25.48■■□□□ 1.67
LIME1-206ENST00000487026 HJURPQ8NCD3 748 aaPredicted RBP25.48■■□□□ 1.67
LIME1-206ENST00000487026 SLC39A13Q96H72 371 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 LMLNQ96KR4 655 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 PRSS16Q9NQE7 514 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 TJP2Q9UDY2 1190 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 XPO7Q9UIA9 1087 aaKnown RBP25.48■■□□□ 1.67
LIME1-206ENST00000487026 WASF3Q9UPY6 502 aa25.48■■□□□ 1.67
LIME1-206ENST00000487026 FRYQ5TBA9 3013 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 USP24Q9UPU5 2620 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 PCNX2A6NKB5 2137 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 METTL12A8MUP2 240 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 BECN2A8MW95 431 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 SART1O43290 800 aaKnown RBP25.47■■□□□ 1.67
LIME1-206ENST00000487026 IGLV3-19P01714 112 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 ATP5BP06576 529 aaKnown RBP25.47■■□□□ 1.67
LIME1-206ENST00000487026 TAF5Q15542 800 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 TMEM110Q86TL2 294 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 CARNMT1Q8N4J0 409 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 FIBINQ8TAL6 211 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 STK32AQ8WU08 396 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 DDX50Q9BQ39 737 aaKnown RBP25.47■■□□□ 1.67
LIME1-206ENST00000487026 LHX5Q9H2C1 402 aa25.47■■□□□ 1.67
LIME1-206ENST00000487026 UPK3BL1B0FP48 263 aa25.46■■□□□ 1.67
LIME1-206ENST00000487026 UPK3BL2E5RIL1 263 aa25.46■■□□□ 1.67
LIME1-206ENST00000487026 CD59P13987 128 aa25.46■■□□□ 1.67
LIME1-206ENST00000487026 FAM193AP78312 1265 aa25.46■■□□□ 1.67
LIME1-206ENST00000487026 SIM1P81133 766 aaPredicted RBP25.46■■□□□ 1.67
LIME1-206ENST00000487026 ZC3H12AQ5D1E8 599 aaKnown RBP25.46■■□□□ 1.67
LIME1-206ENST00000487026 MS4A13Q5J8X5 152 aa25.46■■□□□ 1.67
LIME1-206ENST00000487026 GBP6Q6ZN66 633 aa25.46■■□□□ 1.67
LIME1-206ENST00000487026 MMS22LQ6ZRQ5 1243 aa25.46■■□□□ 1.67
LIME1-206ENST00000487026 ENOSF1Q7L5Y1 443 aa25.46■■□□□ 1.67
LIME1-206ENST00000487026 IRX2Q9BZI1 471 aaPredicted RBP25.46■■□□□ 1.67
LIME1-206ENST00000487026 DNAAF2Q9NVR5 837 aaKnown RBP25.46■■□□□ 1.67
LIME1-206ENST00000487026 EIF2B4Q9UI10 523 aaKnown RBP25.46■■□□□ 1.67
LIME1-206ENST00000487026 INTS6Q9UL03 887 aaKnown RBP25.46■■□□□ 1.67
LIME1-206ENST00000487026 A0A1B0GTW7 788 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 ACSL1P33121 698 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 RPS14P62263 151 aaKnown RBP25.45■■□□□ 1.66
LIME1-206ENST00000487026 YWHAZP63104 245 aaKnown RBP25.45■■□□□ 1.66
LIME1-206ENST00000487026 PITX1P78337 314 aaPredicted RBP25.45■■□□□ 1.66
LIME1-206ENST00000487026 GRIK2Q13002 908 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 NNTQ13423 1086 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 DCAF6Q58WW2 860 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 FSCBQ5H9T9 825 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 WDTC1Q8N5D0 677 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 CAMK1GQ96NX5 476 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 C6orf106Q9H6K1 298 aaPredicted RBP25.45■■□□□ 1.66
LIME1-206ENST00000487026 POPDC2Q9HBU9 364 aa25.45■■□□□ 1.66
LIME1-206ENST00000487026 MUC22E2RYF6 1773 aaPredicted RBP25.45■■□□□ 1.66
LIME1-206ENST00000487026 GJB3O75712 270 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 TRUB2O95900 331 aaKnown RBP25.44■■□□□ 1.66
LIME1-206ENST00000487026 CSKP41240 450 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 PDCLQ13371 301 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 NUMA1Q14980 2115 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 MEA1Q16626 185 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 RAP1GAP2Q684P5 730 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 BEND5Q7L4P6 421 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 PASD1Q8IV76 773 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 LGI2Q8N0V4 545 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 TTC17Q96AE7 1141 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 SCNM1Q9BWG6 230 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 APEX2Q9UBZ4 518 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 SUN2Q9UH99 717 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 NFE2L3Q9Y4A8 694 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 SLCO1B1Q9Y6L6 691 aa25.44■■□□□ 1.66
LIME1-206ENST00000487026 TYW5A2RUC4 315 aaKnown RBP25.43■■□□□ 1.66
LIME1-206ENST00000487026 C1QTNF9BB2RNN3 333 aa25.43■■□□□ 1.66
LIME1-206ENST00000487026 BCAT2O15382 392 aaPredicted RBP25.43■■□□□ 1.66
LIME1-206ENST00000487026 SH3BP5O60239 455 aa25.43■■□□□ 1.66
LIME1-206ENST00000487026 C1QTNF9P0C862 333 aa25.43■■□□□ 1.66
LIME1-206ENST00000487026 PON1P27169 355 aa25.43■■□□□ 1.66
LIME1-206ENST00000487026 MTIF2P46199 727 aaKnown RBP25.43■■□□□ 1.66
LIME1-206ENST00000487026 EXOC3L4Q17RC7 722 aa25.43■■□□□ 1.66
LIME1-206ENST00000487026 SNX19Q92543 992 aa25.43■■□□□ 1.66
LIME1-206ENST00000487026 MYO19Q96H55 970 aa25.43■■□□□ 1.66
LIME1-206ENST00000487026 THAP9Q9H5L6 903 aa25.43■■□□□ 1.66
LIME1-206ENST00000487026 AJAP1Q9UKB5 411 aaPredicted RBP25.43■■□□□ 1.66
LIME1-206ENST00000487026 APOEP02649 317 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 DNTTP04053 509 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 TACR2P21452 398 aa25.42■■□□□ 1.66
LIME1-206ENST00000487026 CTSOP43234 321 aaPredicted RBP25.42■■□□□ 1.66
LIME1-206ENST00000487026 NUMBP49757 651 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms