RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 VEPH1Q14D04 833 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 RASA2Q15283 850 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 TAPT1Q6NXT6 567 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 CENPTQ96BT3 561 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 KCTD15Q96SI1 283 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-216ENST00000486741 GEMIN8Q9NWZ8 242 aaKnown RBP13.57□□□□□ -0.24
HMGN1-216ENST00000486741 STOML1Q9UBI4 398 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 AFF4Q9UHB7 1163 aaKnown RBP13.57□□□□□ -0.24
HMGN1-216ENST00000486741 NRAPQ86VF7 1730 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 H0YGN5 161 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 TM9SF1O15321 606 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 ALDH2P05091 517 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 F7P08709 466 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-216ENST00000486741 RALBP11234 206 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 MTFR1Q15390 333 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 LAYNQ6UX15 382 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 CDC26Q8NHZ8 85 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 NFS1Q9Y697 457 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 COL1A2P08123 1366 aa13.57□□□□□ -0.24
HMGN1-216ENST00000486741 GLRA3O75311 464 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 GRIA1P42261 906 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 UGP2Q16851 508 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 ZNF792Q3KQV3 632 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 FUKQ8N0W3 1084 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 TMA16Q96EY4 203 aaKnown RBP13.56□□□□□ -0.24
HMGN1-216ENST00000486741 C16orf70Q9BSU1 422 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-216ENST00000486741 KPNA6O60684 536 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 CPA3P15088 417 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 MAXP61244 160 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 MAP3K21Q5TCX8 1036 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 SH3TC2Q8TF17 1288 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 LRGUKQ96M69 825 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 NAT9Q9BTE0 207 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 KIAA1551Q9HCM1 1747 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 XPO1O14980 1071 aaKnown RBP13.56□□□□□ -0.24
HMGN1-216ENST00000486741 SH3BP5O60239 455 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 PLK1P53350 603 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 SLC25A52Q3SY17 297 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 SYPL2Q5VXT5 272 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 MCRS1Q96EZ8 462 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 PCED1BQ96HM7 432 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 SYT11Q9BT88 431 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 IRAK4Q9NWZ3 460 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 A0A096LPK6 155 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 YJEFN3A6XGL0 299 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 E7ENQ6 273 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 MDM4O15151 490 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 S100BP04271 92 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-216ENST00000486741 TFE3P19532 575 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-216ENST00000486741 ADRA1BP35368 520 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 HARS2P49590 506 aaKnown RBP13.56□□□□□ -0.24
HMGN1-216ENST00000486741 CSE1LP55060 971 aaKnown RBP13.56□□□□□ -0.24
HMGN1-216ENST00000486741 TBX4P57082 545 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 CSHL1Q14406 222 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 UNC5AQ6ZN44 842 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 CMC1Q7Z7K0 106 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 KCNMB4Q86W47 210 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 TNS4Q8IZW8 715 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 SPATA6LQ8N4H0 392 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGN1-216ENST00000486741 MTBPQ96DY7 904 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 OSBPL7Q9BZF2 842 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 NDFIP2Q9NV92 336 aa13.56□□□□□ -0.24
HMGN1-216ENST00000486741 TPP1O14773 563 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 ABHD2P08910 425 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 SKIP12755 728 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 SERPINB5P36952 375 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 GP5P40197 560 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 HIC1Q14526 733 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 NFE2Q16621 373 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-216ENST00000486741 GBP5Q96PP8 586 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 EBNA1BP2Q99848 306 aaKnown RBP13.55□□□□□ -0.24
HMGN1-216ENST00000486741 BCAP29Q9UHQ4 241 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 FCHO1O14526 889 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 CNMDO75829 334 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 GJA5P36382 358 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 POU5F1Q01860 360 aaKnown RBP13.55□□□□□ -0.24
HMGN1-216ENST00000486741 FOXD4Q12950 439 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-216ENST00000486741 KCNA10Q16322 511 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 MFSD5Q6N075 450 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 LINC00523Q86TU6 105 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 ATP6V0D2Q8N8Y2 350 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 SLC35B2Q8TB61 432 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 COLEC11Q9BWP8 271 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 FBXO6Q9NRD1 293 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-216ENST00000486741 HACD3Q9P035 362 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 DSEQ9UL01 958 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 AAR2Q9Y312 384 aaKnown RBP13.55□□□□□ -0.24
HMGN1-216ENST00000486741 GOLGB1Q14789 3259 aaKnown RBP13.55□□□□□ -0.24
HMGN1-216ENST00000486741 IGKV6D-21A0A0A0MT36 114 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 SNX2O60749 519 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 SMIM24O75264 130 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 SCNN1BP51168 640 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 CCL23P55773 120 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
HMGN1-216ENST00000486741 MSS51Q4VC12 460 aa13.55□□□□□ -0.24
HMGN1-216ENST00000486741 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms