RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SIGLEC10Q96LC7 697 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 EBNA1BP2Q99848 306 aaKnown RBP20.96■□□□□ 0.95
HPS3-206ENST00000486530 ELAC2Q9BQ52 826 aaKnown RBP20.96■□□□□ 0.95
HPS3-206ENST00000486530 BRD8Q9H0E9 1235 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 TBC1D13Q9NVG8 400 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 NR2E3Q9Y5X4 410 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 OAZ2O95190 189 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 ZWINTO95229 277 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 AMHP03971 560 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 CCL5P13501 91 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 CYP2C18P33260 490 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 SERPINB6P35237 376 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 GRIK1P39086 918 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 WASHC5Q12768 1159 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 PARP6Q2NL67 630 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 DCP1BQ8IZD4 617 aaKnown RBP20.96■□□□□ 0.95
HPS3-206ENST00000486530 DNAJC5GQ8N7S2 189 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 SCAMP5Q8TAC9 235 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 FAM193BQ96PV7 902 aaPredicted RBP20.96■□□□□ 0.95
HPS3-206ENST00000486530 ZCWPW1Q9H0M4 648 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 ABCC13Q9NSE7 274 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 FGFR1OP2Q9NVK5 253 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 TMEM161AQ9NX61 479 aa20.96■□□□□ 0.95
HPS3-206ENST00000486530 PLXNA3P51805 1871 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 PIAS1O75925 651 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 APOEP02649 317 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 C1QAP02745 245 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 RPA3P35244 121 aaPredicted RBP20.95■□□□□ 0.94
HPS3-206ENST00000486530 OR1G1P47890 313 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 RNF187Q5TA31 235 aaPredicted RBP20.95■□□□□ 0.94
HPS3-206ENST00000486530 CCDC121Q6ZUS5 278 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 SLC26A11Q86WA9 606 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 RNF34Q969K3 372 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 RNF208Q9H0X6 261 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 SEPT10Q9P0V9 454 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 IGSF9Q9P2J2 1179 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 OR12D3Q9UGF7 316 aa20.95■□□□□ 0.94
HPS3-206ENST00000486530 TNFRSF10BO14763 440 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 SNX3O60493 162 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 NBNO60934 754 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 MX2P20592 715 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 PPIDQ08752 370 aaKnown RBP20.94■□□□□ 0.94
HPS3-206ENST00000486530 BFSP2Q13515 415 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 SLC39A12Q504Y0 691 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 UNC5AQ6ZN44 842 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 LRRC6Q86X45 466 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 ZNF567Q8N184 647 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 NETO2Q8NC67 525 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 GSDMBQ8TAX9 411 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 PAIP2Q9BPZ3 127 aaKnown RBP20.94■□□□□ 0.94
HPS3-206ENST00000486530 OSBPL2Q9H1P3 480 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 PLAC1Q9HBJ0 212 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 ZNF180Q9UJW8 692 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 MAD1L1Q9Y6D9 718 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 VWA8A3KMH1 1905 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 IRAK2O43187 625 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 MTSS1O43312 755 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 OAS1P00973 400 aaKnown RBP20.94■□□□□ 0.94
HPS3-206ENST00000486530 IFRD2Q12894 506 aaPredicted RBP20.94■□□□□ 0.94
HPS3-206ENST00000486530 EIF4EBP2Q13542 120 aaPredicted RBP20.94■□□□□ 0.94
HPS3-206ENST00000486530 BRMS1LQ5PSV4 323 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 BTBD8Q5XKL5 378 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 LRRC8BQ6P9F7 803 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 PRPF39Q86UA1 669 aaKnown RBP20.94■□□□□ 0.94
HPS3-206ENST00000486530 HDAC11Q96DB2 347 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 FUBP3Q96I24 572 aaKnown RBP eCLIP20.94■□□□□ 0.94
HPS3-206ENST00000486530 ELAC1Q9H777 363 aaKnown RBP20.94■□□□□ 0.94
HPS3-206ENST00000486530 ARHGEF38Q9NXL2 777 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 PCDHA11Q9Y5I1 949 aa20.94■□□□□ 0.94
HPS3-206ENST00000486530 SHROOM3Q8TF72 1996 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 SYN3O14994 580 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 TM9SF1O15321 606 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 LRIG2O94898 1065 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 MT-ND3P03897 115 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 TAC1P20366 129 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 PSMB4P28070 264 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 MAGEA9P43362 315 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 NFE2Q16621 373 aaPredicted RBP20.93■□□□□ 0.94
HPS3-206ENST00000486530 RGS9BPQ6ZS82 235 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 NPWQ8N729 165 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 PDCD7Q8N8D1 485 aaKnown RBP20.93■□□□□ 0.94
HPS3-206ENST00000486530 SMOC2Q9H3U7 446 aa20.93■□□□□ 0.94
HPS3-206ENST00000486530 PRG3Q9Y2Y8 225 aaPredicted RBP20.93■□□□□ 0.94
HPS3-206ENST00000486530 OR4Q2P0C623 313 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 PTPN3P26045 913 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 EPHB2P29323 1055 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 FOXN2P32314 431 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 GRIA1P42261 906 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 GALNT2Q10471 571 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 PDK4Q16654 411 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 TTC39BQ5VTQ0 682 aaPredicted RBP20.92■□□□□ 0.94
HPS3-206ENST00000486530 HHATQ5VTY9 493 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 CTAGE3PQ8IX95 158 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 TP53INP2Q8IXH6 220 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 C10orf67Q8IYJ2 551 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 MPP5Q8N3R9 675 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 PPM1NQ8N819 430 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 BANPQ8N9N5 519 aa20.92■□□□□ 0.94
HPS3-206ENST00000486530 KLHL8Q9P2G9 620 aaPredicted RBP20.92■□□□□ 0.94
HPS3-206ENST00000486530 DNAJB4Q9UDY4 337 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms