RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 CCR5P51681 352 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 SGSHP51688 502 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 METAP1P53582 386 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 ADPRHP54922 357 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 SGO2Q562F6 1265 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 L1TD1Q5T7N2 865 aaKnown RBP15.9■□□□□ 0.14
U2AF1-211ENST00000486519 CRTC1Q6UUV9 634 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 OXR1Q8N573 874 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 FAM26EQ8N5C1 309 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 MFSD2AQ8NA29 543 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 ARRDC3Q96B67 414 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 ARHGAP20Q9P2F6 1191 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 HMGXB4Q9UGU5 601 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 RASAL2Q9UJF2 1139 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 SCML2Q9UQR0 700 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 NCKAP1Q9Y2A7 1128 aa15.9■□□□□ 0.14
U2AF1-211ENST00000486519 TNFSF15O95150 251 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 MAT2AP31153 395 aaKnown RBP15.89■□□□□ 0.13
U2AF1-211ENST00000486519 DUSP3P51452 185 aaPredicted RBP15.89■□□□□ 0.13
U2AF1-211ENST00000486519 PDX1P52945 283 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 MYL6P60660 151 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 ASIC1P78348 528 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 CST6Q15828 149 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 DUOXA2Q1HG44 320 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 POM121L1PQ3SYA9 428 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 MBLAC2Q68D91 279 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 KLHDC10Q6PID8 442 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 ACOT1Q86TX2 421 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 MMAAQ8IVH4 418 aaKnown RBP15.89■□□□□ 0.13
U2AF1-211ENST00000486519 KCTD17Q8N5Z5 321 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 IFI44Q8TCB0 444 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 MAPK15Q8TD08 544 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 SLC2A14Q8TDB8 520 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 HVCN1Q96D96 273 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 CCDC97Q96F63 343 aaPredicted RBP15.89■□□□□ 0.13
U2AF1-211ENST00000486519 ACCSQ96QU6 501 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 XYLT2Q9H1B5 865 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 SLC25A18Q9H1K4 315 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 CSNK1G1Q9HCP0 422 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 PLA2G4CQ9UP65 541 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 R3HCC1Q9Y3T6 440 aaKnown RBP15.89■□□□□ 0.13
U2AF1-211ENST00000486519 PCDHGA8Q9Y5G5 932 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 ATP8B3O60423 1300 aa15.89■□□□□ 0.13
U2AF1-211ENST00000486519 LRRC72A6NJI9 287 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 LATO43561 262 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 PPFIA2O75334 1257 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 PRPF6O94906 941 aaKnown RBP15.88■□□□□ 0.13
U2AF1-211ENST00000486519 LDHAP00338 332 aaKnown RBP15.88■□□□□ 0.13
U2AF1-211ENST00000486519 ITGB2P05107 769 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 CHKAP35790 457 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 TNNC1P63316 161 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 DRAP1Q14919 205 aaPredicted RBP15.88■□□□□ 0.13
U2AF1-211ENST00000486519 ANKRD1Q15327 319 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 NAPEPLDQ6IQ20 393 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 SCARA5Q6ZMJ2 495 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 KIAA0907Q7Z7F0 614 aaPredicted RBP15.88■□□□□ 0.13
U2AF1-211ENST00000486519 VASH2Q86V25 355 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 CCDC83Q8IWF9 413 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 FAM217AQ8IXS0 508 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 GPD1LQ8N335 351 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 CPXM2Q8N436 756 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 FUCA2Q9BTY2 467 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 SLC2A11Q9BYW1 496 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 FBXO44Q9H4M3 255 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 MRPL44Q9H9J2 332 aaKnown RBP15.88■□□□□ 0.13
U2AF1-211ENST00000486519 FBRSQ9HAH7 460 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 FAM49BQ9NUQ9 324 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 PLEKHB1Q9UF11 243 aaPredicted RBP15.88■□□□□ 0.13
U2AF1-211ENST00000486519 C2CD3Q4AC94 2353 aa15.88■□□□□ 0.13
U2AF1-211ENST00000486519 EPB41L2O43491 1005 aaKnown RBP15.87■□□□□ 0.13
U2AF1-211ENST00000486519 DLDP09622 509 aaKnown RBP15.87■□□□□ 0.13
U2AF1-211ENST00000486519 CD70P32970 193 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 ABCD1P33897 745 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 EFEMP1Q12805 493 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 XKR5Q6UX68 686 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 C12orf29Q8N999 325 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 OR14C36Q8NHC7 312 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 ZNF516Q92618 1163 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 GOLGA1Q92805 767 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 ABCG4Q9H172 646 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 LRRC4CQ9HCJ2 640 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.87■□□□□ 0.13
U2AF1-211ENST00000486519 GGA2Q9UJY4 613 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 NAGPAQ9UK23 515 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 PLAAQ9Y263 795 aa15.87■□□□□ 0.13
U2AF1-211ENST00000486519 NEBLO76041 1014 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 GCNT3O95395 438 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 CYBBP04839 570 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 THEGLP0DJG4 465 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 PABPC1P11940 636 aaKnown RBP15.86■□□□□ 0.13
U2AF1-211ENST00000486519 SLC8A1P32418 973 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 PSMD8P48556 350 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 SLC45A4Q5BKX6 768 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 C9orf64Q5T6V5 341 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 GUSBP11Q6P575 273 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 CLEC20AQ6ZU45 233 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 WDR49Q8IV35 697 aa15.86■□□□□ 0.13
U2AF1-211ENST00000486519 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.86■□□□□ 0.13
U2AF1-211ENST00000486519 ZNF564Q8TBZ8 553 aaPredicted RBP15.86■□□□□ 0.13
U2AF1-211ENST00000486519 LIN37Q96GY3 246 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms