RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ABCC13Q9NSE7 274 aa15.1■□□□□ 0.01
POLR2J3-204ENST00000486319 PIGVQ9NUD9 493 aa15.1■□□□□ 0.01
POLR2J3-204ENST00000486319 ATP8A1Q9Y2Q0 1164 aa15.1■□□□□ 0.01
POLR2J3-204ENST00000486319 SYNJ2BP-COX16A0A087WUM0 186 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 CFAP69A5D8W1 941 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 H3BQF6 201 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 H3BRJ5 948 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 DNALI1O14645 258 aaPredicted RBP15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 TBC1D4O60343 1298 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 SYF2O95926 243 aaKnown RBP15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 CPB1P15086 417 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 ADRA1BP35368 520 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 NR2C2P49116 596 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 VPS41P49754 854 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 PMS2P54278 862 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 ARPP19P56211 112 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 YWHAGP61981 247 aaKnown RBP eCLIP15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 ROR1Q01973 937 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 SCAPQ12770 1279 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 GPR17Q13304 367 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 P3H1Q32P28 736 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 BTBD8Q5XKL5 378 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 SLC8B1Q6J4K2 584 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 PCGF5Q86SE9 256 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 NUP93Q8N1F7 819 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 CSPG4P5Q96PW8 444 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 FAM204AQ9H8W3 233 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 WDR6Q9NNW5 1121 aaKnown RBP15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 DDIT4Q9NX09 232 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 ZDHHC7Q9NXF8 308 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 COX16Q9P0S2 106 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 FBXW11Q9UKB1 542 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 PLAAQ9Y263 795 aa15.09■□□□□ 0.01
POLR2J3-204ENST00000486319 LOC730098B7Z3J9 87 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 TP73O15350 636 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 IFNB1P01574 187 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 RARGP13631 454 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 SP100P23497 879 aaPredicted RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 ZNF135P52742 658 aaPredicted RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 GPS1Q13098 491 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 XRCC4Q13426 336 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 UAP1Q16222 522 aaPredicted RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 HIBCHQ6NVY1 386 aaPredicted RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 DARS2Q6PI48 645 aaKnown RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 C1orf228Q6PIY5 440 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 NPNTQ6UXI9 565 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 BZW1Q7L1Q6 419 aaKnown RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 ARHGAP18Q8N392 663 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 SCAMP5Q8TAC9 235 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 ZNF461Q8TAF7 563 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 EDEM1Q92611 657 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 SH3GL2Q99962 352 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 PABPC3Q9H361 631 aaKnown RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 PIDD1Q9HB75 910 aa15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 CWC15Q9P013 229 aaKnown RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 TPX2Q9ULW0 747 aaKnown RBP15.08■□□□□ 0.01
POLR2J3-204ENST00000486319 GOLGA8KD6RF30 607 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 H7C0C1 242 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 C8AP07357 584 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 ATP5OP48047 213 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 CXCR3P49682 368 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 IFRD2Q12894 506 aaPredicted RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 PPM1LQ5SGD2 360 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 ZC3H18Q86VM9 953 aaKnown RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 GLIS1Q8NBF1 620 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 ADAM32Q8TC27 787 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 DQX1Q8TE96 717 aaKnown RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 RNF139Q8WU17 664 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 SMG7Q92540 1137 aaKnown RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 PRKD2Q9BZL6 878 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 WDCPQ9H6R7 721 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 COMMD8Q9NX08 183 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 SCML2Q9UQR0 700 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 HEY1Q9Y5J3 304 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 BCLAF3A2AJT9 711 aaKnown RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 MTMR11A4FU01 709 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 BDP1A6H8Y1 2624 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 SMAPO00193 183 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 RTN3O95197 1032 aaPredicted RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 ZSCAN5DPP0CG00 497 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 ETS1P14921 441 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 GOT1P17174 413 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 ELF1P32519 619 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 ACTN2P35609 894 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 EIF3BP55884 814 aaKnown RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 MORF4L2Q15014 288 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 DDR2Q16832 855 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 CCDC149Q6ZUS6 474 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 TRMT10CQ7L0Y3 403 aaKnown RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 PRUNE1Q86TP1 453 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 TAC4Q86UU9 113 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 MON1AQ86VX9 555 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 RNF135Q8IUD6 432 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 CDKL3Q8IVW4 592 aaPredicted RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 UNC45BQ8IWX7 931 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 PYROXD2Q8N2H3 581 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 ZNF707Q96C28 371 aaPredicted RBP15.07■□□□□ 0
POLR2J3-204ENST00000486319 PGLYRP2Q96PD5 576 aa15.07■□□□□ 0
POLR2J3-204ENST00000486319 WDR27A2RRH5 827 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms