RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 NPC1O15118 1278 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 TIMM44O43615 452 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 PAGE1O75459 146 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 ADCY5O95622 1261 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 HNRNPLP14866 589 aaKnown RBP eCLIP18.4■□□□□ 0.54
SREBF1-213ENST00000485080 SGSHP51688 502 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 ZNF143P52747 638 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-213ENST00000485080 NRLP54845 237 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 MAMLD1Q13495 774 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 C10orf76Q5T2E6 689 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 TRMT11Q7Z4G4 463 aaKnown RBP18.4■□□□□ 0.54
SREBF1-213ENST00000485080 ANKS1BQ7Z6G8 1248 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 CHSY1Q86X52 802 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 CAMKK1Q8N5S9 505 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 IL17RCQ8NAC3 791 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 FIBINQ8TAL6 211 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 MRFAP1L1Q96HT8 127 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 LMLNQ96KR4 655 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 TKTL2Q9H0I9 626 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 C2orf42Q9NWW7 574 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 COX16Q9P0S2 106 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 HCN2Q9UL51 889 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 MMP17Q9ULZ9 603 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 NENFQ9UMX5 172 aa18.4■□□□□ 0.54
SREBF1-213ENST00000485080 ZFHX2Q9C0A1 2572 aaPredicted RBP18.39■□□□□ 0.54
SREBF1-213ENST00000485080 SSU72P8A0A1W2PR75 194 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 FAM170AA1A519 330 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 F5H5T6 163 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 I6L893 689 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-213ENST00000485080 TBL1XO60907 577 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 MFAP3LO75121 409 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 PLEKP08567 350 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-213ENST00000485080 GPD1P21695 349 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 HLA-FP30511 346 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 NBL1P41271 181 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 RPS24P62847 133 aaKnown RBP18.39■□□□□ 0.53
SREBF1-213ENST00000485080 NHLH1Q02575 133 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 CSTF1Q05048 431 aaKnown RBP18.39■□□□□ 0.53
SREBF1-213ENST00000485080 AUHQ13825 339 aaKnown RBP18.39■□□□□ 0.53
SREBF1-213ENST00000485080 C2orf27AQ580R0 203 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 RAP1GAP2Q684P5 730 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 PHLDB2Q86SQ0 1253 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 CNGA4Q8IV77 575 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 ZBTB44Q8NCP5 570 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 WFIKKN2Q8TEU8 576 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 FNIP1Q8TF40 1166 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 MYEOVQ96EZ4 313 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 CNPY3Q9BT09 278 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 ANLNQ9NQW6 1124 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 ZSCAN32Q9NX65 697 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 PCDHGA2Q9Y5H1 932 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 HS3ST4Q9Y661 456 aa18.39■□□□□ 0.53
SREBF1-213ENST00000485080 GPR179Q6PRD1 2367 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 A0A087X0T9 212 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 ANKRD62A6NC57 917 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 TMCO5BA8MYB1 307 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 GJB6O95452 261 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 FAM228BP0C875 321 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 RPL7AP62424 266 aaKnown RBP18.38■□□□□ 0.53
SREBF1-213ENST00000485080 NRG1Q02297 640 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-213ENST00000485080 GEN1Q17RS7 908 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 TSR1Q2NL82 804 aaKnown RBP18.38■□□□□ 0.53
SREBF1-213ENST00000485080 ASTE1Q2TB18 679 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-213ENST00000485080 EOGTQ5NDL2 527 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 RABGAP1LQ5R372 815 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 FBXL22Q6P050 247 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 ZNF683Q8IZ20 524 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 LGI2Q8N0V4 545 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 NTAN1Q96AB6 310 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 ABHD10Q9NUJ1 306 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 ZNHIT6Q9NWK9 470 aaKnown RBP18.38■□□□□ 0.53
SREBF1-213ENST00000485080 ELOVL2Q9NXB9 296 aa18.38■□□□□ 0.53
SREBF1-213ENST00000485080 A0A1B0GVM2 712 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 TCAF2A6NFQ2 919 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 TMEM191CA6NGB0 347 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ADAM23O75077 832 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 LUC7L3O95232 432 aaKnown RBP18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ZNF75DP51815 510 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ATXN1P54253 815 aaKnown RBP18.37■□□□□ 0.53
SREBF1-213ENST00000485080 SEC13P55735 322 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 HDAC4P56524 1084 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ATP11AP98196 1134 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ENPP2Q13822 863 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 DMC1Q14565 340 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 C15orf59Q2T9L4 293 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ARTNQ5T4W7 220 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 EMC10Q5UCC4 262 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ALKBH5Q6P6C2 394 aaKnown RBP18.37■□□□□ 0.53
SREBF1-213ENST00000485080 DCUN1D2Q6PH85 259 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 AHI1Q8N157 1196 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ALLCQ8N6M5 410 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ZNF513Q8N8E2 541 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-213ENST00000485080 UCMAQ8WVF2 138 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 ATOH1Q92858 354 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-213ENST00000485080 MCEEQ96PE7 176 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.37■□□□□ 0.53
SREBF1-213ENST00000485080 SEMA4AQ9H3S1 761 aa18.37■□□□□ 0.53
SREBF1-213ENST00000485080 MRPL47Q9HD33 250 aaKnown RBP18.37■□□□□ 0.53
SREBF1-213ENST00000485080 EBF1Q9UH73 591 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms