RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 H0YGN5 161 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 NPC1O15118 1278 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 EPN2O95208 641 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 PECAM1P16284 738 aaPredicted RBP4.71□□□□□ -1.66
SMC4-215ENST00000484799 PRIM2P49643 509 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 NANOS2P60321 138 aaKnown RBP4.71□□□□□ -1.66
SMC4-215ENST00000484799 ANKRD40Q6AI12 368 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 HMBOX1Q6NT76 420 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 DPP9Q86TI2 863 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 ADHFE1Q8IWW8 467 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 WDR60Q8WVS4 1066 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 PSMD1Q99460 953 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 PIMREGQ9BSJ6 248 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 SFXN1Q9H9B4 322 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 RGL1Q9NZL6 768 aa4.71□□□□□ -1.66
SMC4-215ENST00000484799 J3KTA2 159 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 HNRNPDLO14979 420 aaKnown RBP4.7□□□□□ -1.66
SMC4-215ENST00000484799 CBFA2T3O75081 653 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 CHRNB1P11230 501 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 EGR1P18146 543 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 TGM2P21980 687 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 CASP5P51878 434 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 DMWDQ09019 674 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 ZNF585BQ52M93 769 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 FAM209BQ5JX69 171 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 PIK3CD-AS1Q5SR53 167 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 TTC39AQ5SRH9 613 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 C10orf76Q5T2E6 689 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 PIK3AP1Q6ZUJ8 805 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 C11orf96Q7Z7L8 435 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 WIPF2Q8TF74 440 aaPredicted RBP4.7□□□□□ -1.66
SMC4-215ENST00000484799 ATP2A3Q93084 1043 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 WDR83Q9BRX9 315 aaKnown RBP4.7□□□□□ -1.66
SMC4-215ENST00000484799 SLC52A1Q9NWF4 448 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 PROCRQ9UNN8 238 aa4.7□□□□□ -1.66
SMC4-215ENST00000484799 TTC3P53804 2025 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 PLEKHD1A6NEE1 506 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 PODXLO00592 558 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 PLIN1O60240 522 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 KRT18P05783 430 aaKnown RBP4.69□□□□□ -1.66
SMC4-215ENST00000484799 NBPF7P0C2Y1 421 aaPredicted RBP4.69□□□□□ -1.66
SMC4-215ENST00000484799 TSHRP16473 764 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 ENTPD1P49961 510 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 ZXDBP98169 803 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 GALEQ14376 348 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 GALNT3Q14435 633 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 UBAP2Q5T6F2 1119 aaKnown RBP4.69□□□□□ -1.66
SMC4-215ENST00000484799 HIBCHQ6NVY1 386 aaPredicted RBP4.69□□□□□ -1.66
SMC4-215ENST00000484799 SLC39A5Q6ZMH5 540 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 DDIASQ8IXT1 998 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 IQCF1Q8N6M8 205 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 GLIS1Q8NBF1 620 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 ZFPM2Q8WW38 1151 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 BRI3BPQ8WY22 251 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 CLMNQ96JQ2 1002 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 MEIS3Q99687 375 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 SLCO5A1Q9H2Y9 848 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 EPS8L2Q9H6S3 715 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.69□□□□□ -1.66
SMC4-215ENST00000484799 CA14Q9ULX7 337 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 LRP12Q9Y561 859 aa4.69□□□□□ -1.66
SMC4-215ENST00000484799 A0A1W2PPC4 97 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 FAM234BA2RU67 622 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 PRSS44E7EML9 344 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 PRR23D1E9PI22 279 aaPredicted RBP4.68□□□□□ -1.66
SMC4-215ENST00000484799 MSI1O43347 362 aaKnown RBP4.68□□□□□ -1.66
SMC4-215ENST00000484799 ALDOAP04075 364 aaKnown RBP4.68□□□□□ -1.66
SMC4-215ENST00000484799 NGFRP08138 427 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 PRR23D2P0DMB1 279 aaPredicted RBP4.68□□□□□ -1.66
SMC4-215ENST00000484799 HARSP12081 509 aaKnown RBP4.68□□□□□ -1.66
SMC4-215ENST00000484799 GABRB3P28472 473 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 GNALP38405 381 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 PGM5Q15124 567 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 ASIC2Q16515 512 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 WASHC2DQ5SRD0 308 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 ARL6IP4Q66PJ3 421 aaKnown RBP4.68□□□□□ -1.66
SMC4-215ENST00000484799 NUGGCQ68CJ6 796 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 CYB5RLQ6IPT4 315 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 PELI3Q8N2H9 469 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 SLC22A17Q8WUG5 538 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 EME1Q96AY2 570 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 REXO5Q96IC2 774 aaKnown RBP4.68□□□□□ -1.66
SMC4-215ENST00000484799 SARGQ9BW04 601 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 GATA5Q9BWX5 397 aaPredicted RBP4.68□□□□□ -1.66
SMC4-215ENST00000484799 ISCUQ9H1K1 167 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 MYLK2Q9H1R3 596 aa4.68□□□□□ -1.66
SMC4-215ENST00000484799 TBC1D3DA0A087WVF3 549 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 TBC1D3IA0A087WXS9 549 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 TBC1D3EA0A087X179 549 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 TBC1D3KA0A087X1G2 549 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 TBC1D3BA6NDS4 549 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 TBC1D3FA6NER0 549 aaPredicted RBP4.67□□□□□ -1.66
SMC4-215ENST00000484799 OR2W5A6NFC9 320 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 TBC1D3LB9A6J9 549 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 TNFRSF13BO14836 293 aaPredicted RBP4.67□□□□□ -1.66
SMC4-215ENST00000484799 CNTN5O94779 1100 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 CYP1A2P05177 515 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 MYL1P05976 194 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 MYL3P08590 195 aa4.67□□□□□ -1.66
SMC4-215ENST00000484799 RFPL3SP0C7P2 107 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms