RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 MLKLQ8NB16 471 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 FIBINQ8TAL6 211 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 WFDC5Q8TCV5 224 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 TTC17Q96AE7 1141 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 LMLNQ96KR4 655 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 TRIM62Q9BVG3 475 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 LHX5Q9H2C1 402 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 POPDC2Q9HBU9 364 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 ACP6Q9NPH0 428 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 DNAAF2Q9NVR5 837 aaKnown RBP9.79□□□□□ -0.84
NUP50-215ENST00000484186 CYTH4Q9UIA0 394 aa9.79□□□□□ -0.84
NUP50-215ENST00000484186 A0A1B0GTW7 788 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 GTPBP10A4D1E9 387 aaKnown RBP9.78□□□□□ -0.84
NUP50-215ENST00000484186 BECN2A8MW95 431 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 E5RJQ4 531 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 USP8P40818 1118 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 ST8SIA6P61647 398 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 YWHAZP63104 245 aaKnown RBP9.78□□□□□ -0.84
NUP50-215ENST00000484186 APBA1Q02410 837 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 FOXC1Q12948 553 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 ST3GAL2Q16842 350 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 TPD52L1Q16890 204 aaPredicted RBP9.78□□□□□ -0.84
NUP50-215ENST00000484186 MS4A13Q5J8X5 152 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 DCAF12L1Q5VU92 463 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 SMYD5Q6GMV2 418 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 TAC4Q86UU9 113 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 FAM124AQ86V42 546 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 CACUL1Q86Y37 369 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 CCDC117Q8IWD4 279 aaPredicted RBP9.78□□□□□ -0.84
NUP50-215ENST00000484186 CARNMT1Q8N4J0 409 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 WDTC1Q8N5D0 677 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 ZNF366Q8N895 744 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 HJURPQ8NCD3 748 aaPredicted RBP9.78□□□□□ -0.84
NUP50-215ENST00000484186 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 SHC3Q92529 594 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 MYEOVQ96EZ4 313 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 PRICKLE1Q96MT3 831 aaPredicted RBP9.78□□□□□ -0.84
NUP50-215ENST00000484186 ZDHHC5Q9C0B5 715 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 NUCKS1Q9H1E3 243 aaKnown RBP9.78□□□□□ -0.84
NUP50-215ENST00000484186 THAP9Q9H5L6 903 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 FBRSQ9HAH7 460 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 PRSS16Q9NQE7 514 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 CHMP5Q9NZZ3 219 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 APEX2Q9UBZ4 518 aa9.78□□□□□ -0.84
NUP50-215ENST00000484186 ACACBO00763 2458 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 ASCC3Q8N3C0 2202 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 GJB3O75712 270 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 TRUB2O95900 331 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 MOCS2O96007 188 aaPredicted RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 IGLV3-25P01717 112 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 APOEP02649 317 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 DNTTP04053 509 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 ASLP04424 464 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 CD59P13987 128 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 PON1P27169 355 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 MTIF2P46199 727 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 RPS14P62263 151 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 RPS24P62847 133 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 PTK2Q05397 1052 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 ZBTB16Q05516 673 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 SLC14A1Q13336 389 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 PDCLQ13371 301 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 EIF4EBP2Q13542 120 aaPredicted RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 TAF5Q15542 800 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 DCAF6Q58WW2 860 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 ZC3H12AQ5D1E8 599 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 LGI2Q8N0V4 545 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 CFAP52Q8N1V2 620 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 ZCCHC9Q8N567 271 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 ATP6V0D2Q8N8Y2 350 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 OR2I1PQ8NGU4 316 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 PPP1R13BQ96KQ4 1090 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 BTN2A3PQ96KV6 586 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 MIR1-1HGQ9H1L0 117 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 PCED1AQ9H1Q7 454 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUP50-215ENST00000484186 TJP2Q9UDY2 1190 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 SLC12A6Q9UHW9 1150 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 EIF2B4Q9UI10 523 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 XPO7Q9UIA9 1087 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 DNAJC12Q9UKB3 198 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 INTS6Q9UL03 887 aaKnown RBP9.77□□□□□ -0.85
NUP50-215ENST00000484186 PCDHGC3Q9UN70 934 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 WASF3Q9UPY6 502 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 CKAP5Q14008 2032 aa9.77□□□□□ -0.85
NUP50-215ENST00000484186 LAMA1P25391 3075 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 ADAMTS9Q9P2N4 1935 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 PCDH15Q96QU1 1955 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 H0Y626 953 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 FOXN3O00409 490 aaPredicted RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 BCAT2O15382 392 aaPredicted RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 KRT37O76014 449 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 LUC7L3O95232 432 aaKnown RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 MOCS3O95396 460 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 TOP3BO95985 862 aaKnown RBP9.76□□□□□ -0.85
NUP50-215ENST00000484186 GLI1P08151 1106 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 TACR2P21452 398 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 ACSL1P33121 698 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 CSKP41240 450 aa9.76□□□□□ -0.85
NUP50-215ENST00000484186 PITX1P78337 314 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms