RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 LMO2P25791 158 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 GNL1P36915 607 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 CCNFP41002 786 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ATXN3P54252 364 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 TNNC1P63316 161 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 NOP14P78316 857 aaKnown RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 IRX4P78413 519 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 IFRD2Q12894 506 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 RESTQ13127 1097 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 DHCR24Q15392 516 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 UAP1L1Q3KQV9 507 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 TRIM61Q5EBN2 209 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 MDH1BQ5I0G3 518 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 SPDYCQ5MJ68 293 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 BTBD8Q5XKL5 378 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 SLC6A19Q695T7 634 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 LIMS2Q7Z4I7 341 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 FILIP1Q7Z7B0 1213 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 WDR49Q8IV35 697 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 HID1Q8IV36 788 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ADGRG2Q8IZP9 1017 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 SVOPQ8N4V2 548 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ALLCQ8N6M5 410 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 TXNDC5Q8NBS9 432 aaKnown RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 PDZD8Q8NEN9 1154 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 OR5B17Q8NGF7 314 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 OR6B3Q8NGW1 331 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ZNF507Q8TCN5 953 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 KBTBD7Q8WVZ9 684 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ZNF669Q96BR6 464 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 SCARF2Q96GP6 870 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 PCED1BQ96HM7 432 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 FAM84AQ96KN4 292 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 C8orf48Q96LL4 319 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 FNBP1Q96RU3 617 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 TTLL2Q9BWV7 592 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ELOVL4Q9GZR5 314 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 SNX25Q9H3E2 840 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 SLC32A1Q9H598 525 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 CRTAC1Q9NQ79 661 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 ARHGEF4Q9NR80 690 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 SMPD4Q9NXE4 827 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 TBC1D14Q9P2M4 693 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 KLHL3Q9UH77 587 aa6.23□□□□□ -1.41
CSDE1-207ENST00000483407 EVLQ9UI08 416 aaPredicted RBP6.23□□□□□ -1.41
CSDE1-207ENST00000483407 SDK1Q7Z5N4 2213 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TCRBV21S2A2A0A5A6 115 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 E2F8A0AVK6 867 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 A8MXQ7 604 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 B2RBV5 119 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 C1QTNF9BB2RNN3 333 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 PATE3B3GLJ2 98 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 CDX4O14627 284 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TACC1O75410 805 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 CLSTN1O94985 981 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 RTN3O95197 1032 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 OLFM2O95897 454 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 OAS1P00973 400 aaKnown RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 C1QTNF9P0C862 333 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 DLATP10515 647 aaKnown RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 MBL2P11226 248 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 ADH5P11766 374 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TNNI1P19237 187 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 RDXP35241 583 aaKnown RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 HOXD12P35452 270 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 P2RY2P41231 377 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 GRIA2P42262 883 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TNFRSF4P43489 277 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 ZXDBP98169 803 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 AMPD3Q01432 767 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 CEBPZQ03701 1054 aaKnown RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 GAD2Q05329 585 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TAF10Q12962 218 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TRPC3Q13507 836 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 NCAPHQ15003 741 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 WDR72Q3MJ13 1102 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 LYSMD4Q5XG99 296 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 MRM1Q6IN84 353 aaKnown RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 VHLLQ6RSH7 139 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 ACAD11Q709F0 780 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TRAPPC11Q7Z392 1133 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TRMT11Q7Z4G4 463 aaKnown RBP6.22□□□□□ -1.41
CSDE1-207ENST00000483407 RABEPKQ7Z6M1 372 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 CBWD2Q8IUF1 395 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 SYT12Q8IV01 421 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 TMEFF1Q8IYR6 380 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 NUP93Q8N1F7 819 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 HDDC3Q8N4P3 179 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 IL17RCQ8NAC3 791 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 KCT2Q8NC54 265 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 FAM13CQ8NE31 585 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 DEFB124Q8NES8 71 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 OLIG1Q8TAK6 271 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 HMGB4Q8WW32 186 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 RLN3Q8WXF3 142 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 OTUB2Q96DC9 234 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 CLIC6Q96NY7 704 aa6.22□□□□□ -1.41
CSDE1-207ENST00000483407 MRPL45Q9BRJ2 306 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms