RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 C4orf47A7E2U8 309 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 IRAK2O43187 625 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 TSPAN3O60637 253 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 NDUFS2O75306 463 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 LETM1O95202 739 aaPredicted RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 CALCAP01258 141 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 IGLV3-27P01718 113 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 HOXD9P28356 352 aaPredicted RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 MTIF2P46199 727 aaKnown RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 IRX4P78413 519 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 ZNF33AQ06730 810 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 NNTQ13423 1086 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 ZNF234Q14588 700 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 EXOC3L4Q17RC7 722 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 SKOR2Q2VWA4 1001 aaPredicted RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 MPP7Q5T2T1 576 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 KIAA1324Q6UXG2 1013 aaKnown RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 BEND5Q7L4P6 421 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 RABEPKQ7Z6M1 372 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 FAM114A1Q8IWE2 563 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 CEP76Q8TAP6 659 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 MED15Q96RN5 788 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 DDX50Q9BQ39 737 aaKnown RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 ATP13A2Q9NQ11 1180 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 TMEM9BQ9NQ34 198 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 APEX2Q9UBZ4 518 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 CYP8B1Q9UNU6 501 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 TYW5A2RUC4 315 aaKnown RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 PATE3B3GLJ2 98 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 CAPN9O14815 690 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 THAP12O43422 761 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 ACSL4O60488 711 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 SLC9A1P19634 815 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 HLA-FP30511 346 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 ARHGAP44Q17R89 818 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 DUOXA1Q1HG43 343 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 FUT11Q495W5 492 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 PIK3R6Q5UE93 754 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 PEAR1Q5VY43 1037 aaPredicted RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 SLC23A3Q6PIS1 610 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 AHI1Q8N157 1196 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 DQX1Q8TE96 717 aaKnown RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 HPS1Q92902 700 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 FOXJ1Q92949 421 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 ERLEC1Q96DZ1 483 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 CLSTN2Q9H4D0 955 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 THAP9Q9H5L6 903 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 PRDM16Q9HAZ2 1276 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 TMEM74BQ9NUR3 256 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 PILRBQ9UKJ0 227 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 PLA2G4CQ9UP65 541 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 TLR6Q9Y2C9 796 aa13.3□□□□□ -0.28
COL21A1-209ENST00000482933 TNRC6BQ9UPQ9 1833 aaKnown RBP13.3□□□□□ -0.28
COL21A1-209ENST00000482933 CEP192Q8TEP8 1941 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 SIAH2O43255 324 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 TBL1XO60907 577 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 EPHX1P07099 455 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 PRKCSHP14314 528 aaPredicted RBP13.29□□□□□ -0.28
COL21A1-209ENST00000482933 ITPKAP23677 461 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 USP8P40818 1118 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 SH3BP2P78314 561 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 MAN2A1Q16706 1144 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 TMEM215Q68D42 235 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 DENND1BQ6P3S1 775 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 SERPINA13PQ6UXR4 307 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 CHST9Q7L1S5 443 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 TMEM110Q86TL2 294 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 TMPRSS6Q8IU80 811 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 CCDC117Q8IWD4 279 aaPredicted RBP13.29□□□□□ -0.28
COL21A1-209ENST00000482933 DEFB119Q8N690 84 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 PRCCQ92733 491 aaPredicted RBP13.29□□□□□ -0.28
COL21A1-209ENST00000482933 SIPA1Q96FS4 1042 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 ZNF419Q96HQ0 510 aaPredicted RBP13.29□□□□□ -0.28
COL21A1-209ENST00000482933 POPDC2Q9HBU9 364 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 NAALADL1Q9UQQ1 740 aa13.29□□□□□ -0.28
COL21A1-209ENST00000482933 ATXN2Q99700 1313 aaKnown RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 E5RJQ4 531 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 CDX4O14627 284 aaPredicted RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 KCNK5O95279 499 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 FYNP06241 537 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 ATP5BP06576 529 aaKnown RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 ACADMP11310 421 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 PABPC1P11940 636 aaKnown RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 PON1P27169 355 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 ERCC5P28715 1186 aaPredicted RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 CD6P30203 668 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 OXTRP30559 389 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 ATXN3P54252 364 aaPredicted RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 PTK2Q05397 1052 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 SYCP2LQ5T4T6 812 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 GJB7Q6PEY0 223 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 KIAA0907Q7Z7F0 614 aaPredicted RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 IRF2BP1Q8IU81 584 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 HJURPQ8NCD3 748 aaPredicted RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 SORCS1Q8WY21 1168 aa13.28□□□□□ -0.28
COL21A1-209ENST00000482933 FCRL2Q96LA5 508 aaPredicted RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 MKRN2Q9H000 416 aaKnown RBP13.28□□□□□ -0.28
COL21A1-209ENST00000482933 NUP62CLQ9H1M0 184 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms