RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 PORP16435 677 aaPredicted RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CTGFP29279 349 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 ACSL1P33121 698 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 GRK5P34947 590 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 MLH1P40692 756 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 PNPLA4P41247 253 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 MCM2P49736 904 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 MVDP53602 400 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CDH15P55291 814 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CDK18Q07002 472 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 SEC23BQ15437 767 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 FBXO43Q4G163 708 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 RABL3Q5HYI8 236 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 C1QTNF12Q5T7M4 302 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3GQ6DHY5 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3CQ6IPX1 549 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 DENND1BQ6P3S1 775 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 ATF7IPQ6VMQ6 1270 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 KYAT3Q6YP21 454 aaKnown RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CPLX4Q7Z7G2 160 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 RAB11FIP4Q86YS3 637 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 P3H2Q8IVL5 708 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 TBC1D3Q8IZP1 549 aaPredicted RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 ANKRD44Q8N8A2 993 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 MAFAQ8NHW3 353 aaPredicted RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 METTL6Q8TCB7 284 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 SH3RF3Q8TEJ3 882 aaPredicted RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 OVCA2Q8WZ82 227 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 USP6NLQ92738 828 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 PIGSQ96S52 555 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 ADOQ96SZ5 270 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 EIF3CQ99613 913 aaKnown RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 NUDT16L1Q9BRJ7 211 aaKnown RBP3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CDCP1Q9H5V8 836 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 SLC22A11Q9NSA0 550 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 RXFP3Q9NSD7 469 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CEP72Q9P209 647 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CD207Q9UJ71 328 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 NFU1Q9UMS0 254 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 PCDHGB4Q9UN71 923 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 GDAQ9Y2T3 454 aa3.99□□□□□ -1.77
CLCC1-209ENST00000482889 CYP3A7-CYP3A51PA0A087WV96 503 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 hCG_1807616A0A1W2PRN6 198 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 WDR27A2RRH5 827 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 C16orf96A6NNT2 1141 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 AGAP14A8MT82 685 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 A8MVJ9 347 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 TRIM24O15164 1050 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 SLC16A3O15427 465 aaKnown RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 SEPT4O43236 478 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 ANP32CO43423 234 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 SUV39H1O43463 412 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 TULP3O75386 442 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 PGM3O95394 542 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 CLEC3BP05452 202 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 WEE2P0C1S8 567 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 GLULP15104 373 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 CD19P15391 556 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 CHMP24386 653 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 CYP3A7P24462 503 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 PRKCHP24723 683 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 IGHMBP2P38935 993 aaKnown RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 PAFAH1B1P43034 410 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 DIO1P49895 249 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 MTHFSP49914 203 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 RPS3AP61247 264 aaKnown RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 PSMC6P62333 389 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 RAE1P78406 368 aaKnown RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 IFI35P80217 286 aaPredicted RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 HHEXQ03014 270 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 THOC5Q13769 683 aaKnown RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 CAMK1Q14012 370 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 EIF4A2Q14240 407 aaKnown RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 TBRG1Q3YBR2 411 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 SLC9B1Q4ZJI4 515 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 ZNF766Q5HY98 468 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 SPDYAQ5MJ70 313 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 MTFR2Q6P444 385 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 VWA1Q6PCB0 445 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 MON1AQ86VX9 555 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 PLD5Q8N7P1 536 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 GPATCH11Q8N954 259 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 EXD3Q8N9H8 876 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 B3GALNT2Q8NCR0 500 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 BEND2Q8NDZ0 799 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 ASB10Q8WXI3 467 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 KCNJ9Q92806 393 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 RFKQ969G6 155 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 FUBP1Q96AE4 644 aaKnown RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 SH3KBP1Q96B97 665 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 KAZALD1Q96I82 304 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 NR1H4Q96RI1 486 aaPredicted RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 NPAS1Q99742 590 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 MXD3Q9BW11 206 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 HEMGNQ9BXL5 484 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 INTS2Q9H0H0 1204 aaKnown RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 AURKAIP1Q9NWT8 199 aaPredicted RBP3.98□□□□□ -1.77
CLCC1-209ENST00000482889 KLQ9UEF7 1012 aa3.98□□□□□ -1.77
CLCC1-209ENST00000482889 GIMAP2Q9UG22 337 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms