RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TEDDM1Q5T9Z0 273 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 PMF1Q6P1K2 205 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 AMIGO2Q86SJ2 522 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 LCA5Q86VQ0 697 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 RYBPQ8N488 228 aaPredicted RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 OR52B2Q96RD2 323 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 FDXACB1Q9BRP7 624 aaPredicted RBP13.05□□□□□ -0.32
VPS52-218ENST00000482399 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 SYBUQ9NX95 663 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 BFARQ9NZS9 450 aa13.05□□□□□ -0.32
VPS52-218ENST00000482399 KLRG2A4D1S0 409 aaPredicted RBP13.04□□□□□ -0.32
VPS52-218ENST00000482399 RNF103O00237 685 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 PLIN3O60664 434 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
VPS52-218ENST00000482399 POLBP06746 335 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 TGM2P21980 687 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 CASP2P42575 452 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 SLC12A2P55011 1212 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 PRPSAP1Q14558 356 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 HSDL1Q3SXM5 330 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 ANKRD20A4Q4UJ75 823 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 BNC2Q6ZN30 1099 aaPredicted RBP13.04□□□□□ -0.32
VPS52-218ENST00000482399 HTR3CQ8WXA8 447 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 IARS2Q9NSE4 1012 aaKnown RBP13.04□□□□□ -0.32
VPS52-218ENST00000482399 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 SIRPGQ9P1W8 387 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 AFG3L2Q9Y4W6 797 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 HES2Q9Y543 173 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 CDY2AQ9Y6F7 541 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 CDY1Q9Y6F8 540 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 V9GYQ6 96 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 CAPN14A8MX76 684 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 TRDMT1O14717 391 aaKnown RBP13.04□□□□□ -0.32
VPS52-218ENST00000482399 ETFBP38117 255 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 KLF10Q13118 480 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 CCNIQ14094 377 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 STILQ15468 1287 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 TBCCQ15814 346 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 HSF5Q4G112 596 aaPredicted RBP13.04□□□□□ -0.32
VPS52-218ENST00000482399 PPP1R26Q5T8A7 1209 aaPredicted RBP13.04□□□□□ -0.32
VPS52-218ENST00000482399 IFNEQ86WN2 208 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 AGAP2Q99490 1192 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 NPAS2Q99743 824 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 MED10Q9BTT4 135 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 CDT1Q9H211 546 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 USP29Q9HBJ7 922 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 EPS15L1Q9UBC2 864 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 PDE4DIPQ5VU43 2346 aa13.04□□□□□ -0.32
VPS52-218ENST00000482399 LAMB2P55268 1798 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 KPNA7A9QM74 516 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 ITGAXP20702 1163 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 FDFT1P37268 417 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
VPS52-218ENST00000482399 LRRC8EQ6NSJ5 796 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 PDSS2Q86YH6 399 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 PQLC1Q8N2U9 271 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 FBXW8Q8N3Y1 598 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.03□□□□□ -0.32
VPS52-218ENST00000482399 DHRS4Q9BTZ2 278 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 FRMD8P1Q9BZ68 369 aaPredicted RBP13.03□□□□□ -0.32
VPS52-218ENST00000482399 ILKAPQ9H0C8 392 aaPredicted RBP13.03□□□□□ -0.32
VPS52-218ENST00000482399 DCDC2Q9UHG0 476 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 ADAMTSL1Q8N6G6 1762 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 PIGNO95427 931 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 HOXC6P09630 235 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 VDRP11473 427 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 ARL2P36404 184 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 RABGGTBP53611 331 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 IRF9Q00978 393 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 CYLC2Q14093 348 aaPredicted RBP13.03□□□□□ -0.32
VPS52-218ENST00000482399 TMEM259Q4ZIN3 620 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 ZPBP2Q6X784 338 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 KYAT3Q6YP21 454 aaKnown RBP13.03□□□□□ -0.32
VPS52-218ENST00000482399 KYQ8NBH2 561 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 SNX15Q9NRS6 342 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 KLK14Q9P0G3 267 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 COMMD3-BMI1R4GMX3 469 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 SPDYE16A6NNV3 312 aaPredicted RBP13.03□□□□□ -0.32
VPS52-218ENST00000482399 GPR25O00155 361 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 CCDC130P13994 396 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 XRCC1P18887 633 aaPredicted RBP13.03□□□□□ -0.32
VPS52-218ENST00000482399 TSPAN8P19075 237 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 CRABP2P29373 138 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 GNL1P36915 607 aaPredicted RBP13.03□□□□□ -0.32
VPS52-218ENST00000482399 GABRB2P47870 512 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 SULT1E1P49888 294 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 ZNF132P52740 706 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 IER5Q5VY09 327 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 PQLC3Q8N755 202 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 MINDY3Q9H8M7 445 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 COPG2Q9UBF2 871 aa13.03□□□□□ -0.32
VPS52-218ENST00000482399 CNTNAP1P78357 1384 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 NHSQ6T4R5 1651 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 TK2O00142 265 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 MSCO60682 206 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 ALDOAP04075 364 aaKnown RBP13.02□□□□□ -0.32
VPS52-218ENST00000482399 GPD2P43304 727 aa13.02□□□□□ -0.32
VPS52-218ENST00000482399 MXD4Q14582 209 aaPredicted RBP13.02□□□□□ -0.32
VPS52-218ENST00000482399 PDK2Q15119 407 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms