RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CNGA3Q16281 694 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 TAF12Q16514 161 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 TMEM63BQ5T3F8 832 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 SERPINA13PQ6UXR4 307 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 RINLQ6ZS11 566 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 GALNT4Q8N4A0 578 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 TMEM57Q8N5G2 664 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 EXD3Q8N9H8 876 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 IL17REQ8NFR9 667 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 CEP70Q8NHQ1 597 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 PNISRQ8TF01 805 aaKnown RBP6.41□□□□□ -1.38
SF3B1-210ENST00000482158 USP13Q92995 863 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-210ENST00000482158 ZNF845Q96IR2 970 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-210ENST00000482158 HIC2Q96JB3 615 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 FYTTD1Q96QD9 318 aaKnown RBP6.41□□□□□ -1.38
SF3B1-210ENST00000482158 DNAJC16Q9Y2G8 782 aa6.41□□□□□ -1.38
SF3B1-210ENST00000482158 SMIM22K7EJ46 135 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 GCATO75600 419 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 AGR2O95994 175 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 CNPP09543 421 aaKnown RBP6.4□□□□□ -1.38
SF3B1-210ENST00000482158 CSF1P09603 554 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 ACP5P13686 325 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 CHN1P15882 459 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 SLC8A1P32418 973 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 IDUAP35475 653 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 MCM2P49736 904 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 SLC37A1P57057 533 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 PROK1P58294 105 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 DMWDQ09019 674 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 SEC23BQ15437 767 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 SLC39A5Q6ZMH5 540 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 SYNE3Q6ZMZ3 975 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 TFAP2DQ7Z6R9 452 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 TMTC1Q8IUR5 882 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 ADGRF3Q8IZF5 1079 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 PTGR2Q8N8N7 351 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-210ENST00000482158 LINS1Q8NG48 757 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 TBATAQ96M53 351 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 GPR78Q96P69 363 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 PIGSQ96S52 555 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 EIF2AK1Q9BQI3 630 aaKnown RBP6.4□□□□□ -1.38
SF3B1-210ENST00000482158 R3HDMLQ9H3Y0 253 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 TMLHEQ9NVH6 421 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 ASNSD1Q9NWL6 643 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 TMEM160Q9NX00 188 aa6.4□□□□□ -1.38
SF3B1-210ENST00000482158 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.39□□□□□ -1.39
SF3B1-210ENST00000482158 A0A1B0GVC2 190 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 C3orf70A6NLC5 250 aaPredicted RBP6.39□□□□□ -1.39
SF3B1-210ENST00000482158 RRHO14718 337 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 ALDOAP04075 364 aaKnown RBP6.39□□□□□ -1.39
SF3B1-210ENST00000482158 RFPL3SP0C7P2 107 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 VPS41P49754 854 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 SHC2P98077 582 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 VSTM1Q6UX27 236 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 RANBP10Q6VN20 620 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 BBS12Q6ZW61 710 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 RFX6Q8HWS3 928 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 ZNF398Q8TD17 642 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 ARRDC3Q96B67 414 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 P2RY11Q96G91 374 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 MAELQ96JY0 434 aaKnown RBP6.39□□□□□ -1.39
SF3B1-210ENST00000482158 SORCS2Q96PQ0 1159 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 PDE11AQ9HCR9 933 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 MTMR4Q9NYA4 1195 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 BAG5Q9UL15 447 aa6.39□□□□□ -1.39
SF3B1-210ENST00000482158 HEMK1Q9Y5R4 338 aaPredicted RBP6.39□□□□□ -1.39
SF3B1-210ENST00000482158 SIRT4Q9Y6E7 314 aaPredicted RBP6.39□□□□□ -1.39
SF3B1-210ENST00000482158 TTC34A8MYJ7 566 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 GRM8O00222 908 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 HNRNPRO43390 633 aaKnown RBP6.38□□□□□ -1.39
SF3B1-210ENST00000482158 PROP1O75360 226 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 CHRM5P08912 532 aaPredicted RBP6.38□□□□□ -1.39
SF3B1-210ENST00000482158 POU5F1BQ06416 359 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 SLC12A1Q13621 1099 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 KPNB1Q14974 876 aaKnown RBP6.38□□□□□ -1.39
SF3B1-210ENST00000482158 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 MAP3K21Q5TCX8 1036 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 PRAMEF17Q5VTA0 474 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 FCRLBQ6BAA4 426 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 MMS22LQ6ZRQ5 1243 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 BOLLQ8N9W6 283 aaKnown RBP6.38□□□□□ -1.39
SF3B1-210ENST00000482158 FSIP1Q8NA03 581 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 SRFBP1Q8NEF9 429 aaKnown RBP6.38□□□□□ -1.39
SF3B1-210ENST00000482158 CELF1Q92879 486 aaKnown RBP6.38□□□□□ -1.39
SF3B1-210ENST00000482158 NUAK2Q9H093 628 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 MLXIPLQ9NP71 852 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 SLC22A11Q9NSA0 550 aa6.38□□□□□ -1.39
SF3B1-210ENST00000482158 RRP7AQ9Y3A4 280 aaKnown RBP6.38□□□□□ -1.39
SF3B1-210ENST00000482158 WDR33Q9C0J8 1336 aaKnown RBP6.38□□□□□ -1.39
SF3B1-210ENST00000482158 ARHGEF17Q96PE2 2063 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-210ENST00000482158 LMTK3Q96Q04 1460 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 SPATA31A5Q5VU36 1347 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 SPATA31A6Q5VVP1 1343 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 SPATA31A7Q8IWB4 1347 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 CYP2A6P11509 494 aaPredicted RBP6.37□□□□□ -1.39
SF3B1-210ENST00000482158 LYL1P12980 280 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 UBE3AQ05086 875 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 CHRNDQ07001 517 aa6.37□□□□□ -1.39
SF3B1-210ENST00000482158 CTXN3Q4LDR2 81 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms