RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 DNAJC16Q9Y2G8 782 aa15.79■□□□□ 0.12
C9orf3-218ENST00000482056 PDCD11Q14690 1871 aaKnown RBP15.79■□□□□ 0.12
C9orf3-218ENST00000482056 PIRO00625 290 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 HUS1O60921 280 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 TBX10O75333 385 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 ALDOAP04075 364 aaKnown RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 MMP3P08254 477 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 ITGA2BP08514 1039 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 PDHA1P08559 390 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 MX2P20592 715 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 AXLP30530 894 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 TAF6P49848 677 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 RPL10AP62906 217 aaKnown RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 AP2B1P63010 937 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 PDE1CQ14123 709 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 LBRQ14739 615 aaKnown RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 MDH1BQ5I0G3 518 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 GRTP1Q5TC63 336 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 ULK2Q8IYT8 1036 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 NME8Q8N427 588 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 OR6J1Q8NGC5 347 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 DTX3LQ8TDB6 740 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 SREK1Q8WXA9 508 aaKnown RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 PGBD4Q96DM1 585 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 APOL6Q9BWW8 343 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 FAM49AQ9H0Q0 323 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 CXCL16Q9H2A7 254 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 ADAM28Q9UKQ2 775 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 SOX13Q9UN79 622 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 PLA2G4CQ9UP65 541 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 F5H423 210 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 STRNO43815 780 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 FGF3P11487 239 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 MYL4P12829 197 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 HOXD8P13378 290 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 NOS2P35228 1153 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 GP5P40197 560 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 DCAF6Q58WW2 860 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 TEDDM1Q5T9Z0 273 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 BSPRYQ5W0U4 402 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 C16orf46Q6P387 395 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 CPNE1Q99829 537 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 THTPAQ9BU02 230 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 MAGEB5Q9BZ81 275 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 C20orf27Q9GZN8 174 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 GPAMQ9HCL2 828 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 IGSF9Q9P2J2 1179 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 DNAJB4Q9UDY4 337 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 MFHAS1Q9Y4C4 1052 aa15.78■□□□□ 0.12
C9orf3-218ENST00000482056 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.78■□□□□ 0.12
C9orf3-218ENST00000482056 PRR5-ARHGAP8B1AHC4 643 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 EEF2KO00418 725 aaKnown RBP15.77■□□□□ 0.12
C9orf3-218ENST00000482056 LMO2P25791 158 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 PSMB4P28070 264 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 TYK2P29597 1187 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 CRADDP78560 199 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 ARHGAP8P85298 464 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 TMEM62Q0P6H9 643 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 ADIGQ0VDE8 80 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 CCDC153Q494R4 210 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 C1orf146Q5VVC0 180 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 UNC5BQ8IZJ1 945 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 NXF3Q9H4D5 531 aaKnown RBP15.77■□□□□ 0.12
C9orf3-218ENST00000482056 SETD4Q9NVD3 440 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 DNAJC28Q9NX36 388 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 EMCNQ9ULC0 261 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 HES2Q9Y543 173 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 RAD54BQ9Y620 910 aa15.77■□□□□ 0.12
C9orf3-218ENST00000482056 MYO18AQ92614 2054 aaKnown RBP15.77■□□□□ 0.11
C9orf3-218ENST00000482056 HCRTO43612 131 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 CREB3O43889 395 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 GPR32O75388 356 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 CDK7P50613 346 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 UBAP2LQ14157 1087 aaKnown RBP15.76■□□□□ 0.11
C9orf3-218ENST00000482056 PAFAH1B3Q15102 231 aaKnown RBP15.76■□□□□ 0.11
C9orf3-218ENST00000482056 DUSP28Q4G0W2 176 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 RIPOR1Q6ZS17 1223 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 PIGZQ86VD9 579 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 SIX6OS1Q8N1H7 587 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 NLGN2Q8NFZ4 835 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 NRG4Q8WWG1 115 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 ARNTL2Q8WYA1 636 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 CERS2Q96G23 380 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 HNRNPABQ99729 332 aaKnown RBP15.76■□□□□ 0.11
C9orf3-218ENST00000482056 EBF4Q9BQW3 602 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 DUSP16Q9BY84 665 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 LRRC40Q9H9A6 602 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 LRRC4Q9HBW1 653 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 SYBUQ9NX95 663 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 SMIM28A0A1B0GU29 152 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-218ENST00000482056 FKBP6O75344 327 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 SKAP2O75563 359 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-218ENST00000482056 TOP3BO95985 862 aaKnown RBP15.76■□□□□ 0.11
C9orf3-218ENST00000482056 GSRP00390 522 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 PROCP04070 461 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 DARSP14868 501 aaKnown RBP15.76■□□□□ 0.11
C9orf3-218ENST00000482056 KCNA4P22459 653 aa15.76■□□□□ 0.11
C9orf3-218ENST00000482056 WARSP23381 471 aaKnown RBP15.76■□□□□ 0.11
C9orf3-218ENST00000482056 SPRP35270 261 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms