RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 EOGTQ5NDL2 527 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 FAM102AQ5T9C2 384 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 TCEAL6Q6IPX3 200 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 CHST9Q7L1S5 443 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 KIAA0907Q7Z7F0 614 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 CHSY1Q86X52 802 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 UNC45BQ8IWX7 931 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 CARNMT1Q8N4J0 409 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 TCEAL3Q969E4 200 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 C18orf8Q96DM3 657 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 CFAP57Q96MR6 1250 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 SPAG5Q96R06 1193 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 NPY6RQ99463 290 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 C11orf70Q9BRQ4 267 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 SYT11Q9BT88 431 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 CIPCQ9C0C6 399 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 METTL5Q9NRN9 209 aaKnown RBP11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 ASNSD1Q9NWL6 643 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 ELOVL2Q9NXB9 296 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 THAP10Q9P2Z0 257 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 GGA2Q9UJY4 613 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 TMEM59LQ9UK28 342 aa11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 MUC22E2RYF6 1773 aaPredicted RBP11.82□□□□□ -0.52
RAPGEF1-207ENST00000481260 PAGE1O75459 146 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 LSM8O95777 96 aaKnown RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 GLI1P08151 1106 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 PABPC1P11940 636 aaKnown RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 UNGP13051 313 aaPredicted RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 MMP8P22894 467 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 MATKP42679 507 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 SULT1E1P49888 294 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 NNTQ13423 1086 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 NR1I3Q14994 352 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 SF3A2Q15428 464 aaKnown RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 CLEC16AQ2KHT3 1053 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 C15orf59Q2T9L4 293 aaPredicted RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 LAIR1Q6GTX8 287 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 FBXL22Q6P050 247 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 ARMCX6Q7L4S7 300 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 IRF2BP2Q7Z5L9 587 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 APCDD1Q8J025 514 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 ANKRD20A12PQ8NF67 263 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 ZNF397Q8NF99 534 aaPredicted RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 AZIN2Q96A70 460 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 NOX5Q96PH1 765 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 MKRN2Q9H000 416 aaKnown RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 NAT10Q9H0A0 1025 aaKnown RBP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 ARRDC1-AS1Q9H2J1 176 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 BCCIPQ9P287 314 aaKnown RBP eCLIP11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 CEP83Q9Y592 693 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 HS3ST4Q9Y661 456 aa11.81□□□□□ -0.52
RAPGEF1-207ENST00000481260 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 CCDC163A0A0D9SF12 145 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 GOLGA6L3A6NEY3 463 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 LRRC53A6NM62 1247 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 GDF9O60383 454 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 CNTN5O94779 1100 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 APOEP02649 317 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 MZF1P28698 734 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 GBP1P32455 592 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 NOS2P35228 1153 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 P2RY2P41231 377 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 CSKP41240 450 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 PTGER3P43115 390 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 FANCCQ00597 558 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 ENPP2Q13822 863 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 AUHQ13825 339 aaKnown RBP11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 MBLAC2Q68D91 279 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 CACNA2D4Q7Z3S7 1137 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 BNIPLQ7Z465 357 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 MFN1Q8IWA4 741 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 TMEFF1Q8IYR6 380 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 ZNF683Q8IZ20 524 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 PGBD3Q8N328 593 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 HJURPQ8NCD3 748 aaPredicted RBP11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 RNF34Q969K3 372 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 NT5C3BQ969T7 300 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 RMDN1Q96DB5 314 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 MYO19Q96H55 970 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 MRGPRX3Q96LB0 322 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 MRGPRX1Q96LB2 322 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 AGPAT1Q99943 283 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 TTYH3Q9C0H2 523 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 SEPT11Q9NVA2 429 aaKnown RBP11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 VANGL2Q9ULK5 521 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 USP18Q9UMW8 372 aa11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 ATXN2Q99700 1313 aaKnown RBP11.8□□□□□ -0.52
RAPGEF1-207ENST00000481260 TCRBV5S1A1TA0A578 114 aa11.79□□□□□ -0.52
RAPGEF1-207ENST00000481260 SMTNL1A8MU46 457 aa11.79□□□□□ -0.52
RAPGEF1-207ENST00000481260 PATE3B3GLJ2 98 aa11.79□□□□□ -0.52
RAPGEF1-207ENST00000481260 ATMINO43313 823 aaPredicted RBP11.79□□□□□ -0.52
RAPGEF1-207ENST00000481260 LUC7L3O95232 432 aaKnown RBP11.79□□□□□ -0.52
RAPGEF1-207ENST00000481260 RETP07949 1114 aa11.79□□□□□ -0.52
RAPGEF1-207ENST00000481260 SKILP12757 684 aa11.79□□□□□ -0.52
RAPGEF1-207ENST00000481260 VAV1P15498 845 aa11.79□□□□□ -0.52
RAPGEF1-207ENST00000481260 PDGFRAP16234 1089 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms