RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MS4A13Q5J8X5 152 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 FKBP15Q5T1M5 1219 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 KIAA1211LQ6NV74 962 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 ZNF677Q86XU0 584 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 RGL4Q8IZJ4 473 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 NDRG1Q92597 394 aaKnown RBP11.87□□□□□ -0.51
CCM2-213ENST00000480658 SLC39A13Q96H72 371 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 FCRL2Q96LA5 508 aaPredicted RBP11.87□□□□□ -0.51
CCM2-213ENST00000480658 HSPA12BQ96MM6 686 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 ZSWIM1Q9BR11 485 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 NCKAP1Q9Y2A7 1128 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 RAD54BQ9Y620 910 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 CEP250Q9BV73 2442 aa11.87□□□□□ -0.51
CCM2-213ENST00000480658 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 A0A1B0GVM2 712 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 TCAF2A6NFQ2 919 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 C4orf47A7E2U8 309 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 KCNU1A8MYU2 1149 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 KCNJ18B7U540 433 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 H0Y626 953 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 PIK3R2O00459 728 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 TM4SF5O14894 197 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 PAPSS1O43252 624 aaPredicted RBP11.86□□□□□ -0.51
CCM2-213ENST00000480658 OPHN1O60890 802 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 MBD3O95983 291 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 F9P00740 461 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 IGLV3-25P01717 112 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 ENGP17813 658 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 SLC9A1P19634 815 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 HOXC13P31276 330 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 TPMTP51580 245 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 KCNJ12Q14500 433 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 DCAF6Q58WW2 860 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 TCP11X2Q5H9J9 407 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 MBLAC2Q68D91 279 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 ZNF776Q68DI1 518 aaPredicted RBP11.86□□□□□ -0.51
CCM2-213ENST00000480658 DENND1BQ6P3S1 775 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 USP30Q70CQ3 517 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 ARMCX6Q7L4S7 300 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 SLC26A9Q7LBE3 791 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 TAC4Q86UU9 113 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 ADIPOR2Q86V24 386 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 CHSY1Q86X52 802 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 FAM71AQ8IYT1 594 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
CCM2-213ENST00000480658 CLEC4CQ8WTT0 213 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 RNF34Q969K3 372 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 SLC2A13Q96QE2 648 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 SGK2Q9HBY8 427 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 ZDHHC4Q9NPG8 344 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 PLCB1Q9NQ66 1216 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 WSB2Q9NYS7 404 aaPredicted RBP11.86□□□□□ -0.51
CCM2-213ENST00000480658 DNAJC12Q9UKB3 198 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 ANGPTL2Q9UKU9 493 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 HCN2Q9UL51 889 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 NAALADL1Q9UQQ1 740 aa11.86□□□□□ -0.51
CCM2-213ENST00000480658 A0A1B0GTW7 788 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 TARSL2A2RTX5 802 aaKnown RBP11.85□□□□□ -0.51
CCM2-213ENST00000480658 ARHGAP33O14559 1287 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 TSPAN3O60637 253 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 DAB1O75553 588 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 KCNK5O95279 499 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 TRIM16O95361 564 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 ITPKAP23677 461 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 NOS2P35228 1153 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 NOVA1P51513 510 aaKnown RBP11.85□□□□□ -0.51
CCM2-213ENST00000480658 SHC2P98077 582 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 RAPGEF1Q13905 1077 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 TEAD4Q15561 434 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 BRMS1LQ5PSV4 323 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 TCEAL6Q6IPX3 200 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 SASS6Q6UVJ0 657 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 DSG4Q86SJ6 1040 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 IRF2BP1Q8IU81 584 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
CCM2-213ENST00000480658 DNASE2BQ8WZ79 361 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 TCEAL3Q969E4 200 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 TTC17Q96AE7 1141 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 SKA1Q96BD8 255 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 TOE1Q96GM8 510 aaKnown RBP11.85□□□□□ -0.51
CCM2-213ENST00000480658 MKRN2Q9H000 416 aaKnown RBP11.85□□□□□ -0.51
CCM2-213ENST00000480658 NAT10Q9H0A0 1025 aaKnown RBP11.85□□□□□ -0.51
CCM2-213ENST00000480658 BTBD1Q9H0C5 482 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 CAPN10Q9HC96 672 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 OSGEPQ9NPF4 335 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 ANO10Q9NW15 660 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 DDIT4Q9NX09 232 aa11.85□□□□□ -0.51
CCM2-213ENST00000480658 EDDM13A0A1B0GTR0 161 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 BECN2A8MW95 431 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 CER1O95813 267 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 MOCS2O96007 188 aaPredicted RBP11.84□□□□□ -0.51
CCM2-213ENST00000480658 ADH1BP00325 375 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 FYNP06241 537 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 CCDC172P0C7W6 258 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 UCHL3P15374 230 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 TACR2P21452 398 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 PRKCHP24723 683 aa11.84□□□□□ -0.51
CCM2-213ENST00000480658 CDH5P33151 784 aaPredicted RBP11.84□□□□□ -0.51
CCM2-213ENST00000480658 MATKP42679 507 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms