RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 NCBP2-AS2Q69YL0 99 aa17.32■□□□□ 0.36
SH3D21-203ENST00000480549 RNF168Q8IYW5 571 aaPredicted RBP17.32■□□□□ 0.36
SH3D21-203ENST00000480549 LBHD1Q9BQE6 289 aaPredicted RBP17.32■□□□□ 0.36
SH3D21-203ENST00000480549 POPDC2Q9HBU9 364 aa17.32■□□□□ 0.36
SH3D21-203ENST00000480549 TMPRSS4Q9NRS4 437 aa17.32■□□□□ 0.36
SH3D21-203ENST00000480549 TBK1Q9UHD2 729 aa17.32■□□□□ 0.36
SH3D21-203ENST00000480549 B3GAT3O94766 335 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 TUSC3Q13454 348 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 ZRSR2Q15696 482 aaKnown RBP17.31■□□□□ 0.36
SH3D21-203ENST00000480549 IRGCQ6NXR0 463 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 MGARPQ8TDB4 240 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 MAML1Q92585 1016 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 RHOBTB2Q9BYZ6 727 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 ETNK2Q9NVF9 386 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 FGFR1OP2Q9NVK5 253 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 PAK5Q9P286 719 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 MFHAS1Q9Y4C4 1052 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 EXOC1LA0A1B0GW35 172 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 YJEFN3A6XGL0 299 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 E7ENQ6 273 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 M0QZQ0 153 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 FBXO21O94952 628 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 CKBP12277 381 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 PCSK1P29120 753 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 FAM171BQ6P995 826 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 CAPN12Q6ZSI9 719 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 BHLHA9Q7RTU4 235 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 TDRPQ86YL5 185 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 PSTKQ8IV42 348 aaKnown RBP17.31■□□□□ 0.36
SH3D21-203ENST00000480549 RIBC1Q8N443 379 aaPredicted RBP17.31■□□□□ 0.36
SH3D21-203ENST00000480549 FITM2Q8N6M3 262 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 MYLPFQ96A32 169 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 PKMYT1Q99640 499 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 VPS37BQ9H9H4 285 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 CSNK1G1Q9HCP0 422 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 TMCO1Q9UM00 188 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 CHMP2BQ9UQN3 213 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 INPP5FQ9Y2H2 1132 aa17.31■□□□□ 0.36
SH3D21-203ENST00000480549 M0QYT0 321 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 INPPL1O15357 1258 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 ZBED1O96006 694 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 ZFXP17010 805 aaPredicted RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 ZNF24P17028 368 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 CCNFP41002 786 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 MBTPS1Q14703 1052 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 ASRGL1Q7L266 308 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 HASPINQ8TF76 798 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 UTP4Q969X6 686 aaKnown RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 SMARCD1Q96GM5 515 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 CNGB3Q9NQW8 809 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 PIGVQ9NUD9 493 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 STAP1Q9ULZ2 295 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 CHADO15335 359 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 SUN1O94901 812 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 ITGB1P05556 798 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 SPATA31D3P0C874 917 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 SKIP12755 728 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 AMPD1P23109 780 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 NR2C2P49116 596 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 LRRC14Q15048 493 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 SPATA31D4Q6ZUB0 917 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 CTU1Q7Z7A3 348 aaKnown RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 RTN4RL1Q86UN2 441 aaPredicted RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 ACBD6Q9BR61 282 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 TRPV6Q9H1D0 765 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 RCOR3Q9P2K3 495 aaPredicted RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 WFS1O76024 890 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 CBLBQ13191 982 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 MTM1Q13496 603 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 DEFB115Q30KQ5 88 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 CNPY1Q3B7I2 92 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 SLC45A4Q5BKX6 768 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 CDKL3Q8IVW4 592 aaPredicted RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 REM2Q8IYK8 340 aaPredicted RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 FBXO36Q8NEA4 188 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 PYROXD1Q8WU10 500 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 RSPH1Q8WYR4 309 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 RAB3IPQ96QF0 476 aaPredicted RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 DDX50Q9BQ39 737 aaKnown RBP17.3■□□□□ 0.36
SH3D21-203ENST00000480549 CCDC134Q9H6E4 229 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 DTLQ9NZJ0 730 aa17.3■□□□□ 0.36
SH3D21-203ENST00000480549 TMEM120BA0PK00 339 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 C9IYK1 514 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 F8W810 466 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 GSTA2P09210 222 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 GM2AP17900 193 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 SSTR1P30872 391 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 INTS6LQ5JSJ4 861 aaKnown RBP17.29■□□□□ 0.36
SH3D21-203ENST00000480549 GBP7Q8N8V2 638 aaPredicted RBP17.29■□□□□ 0.36
SH3D21-203ENST00000480549 TTC8Q8TAM2 541 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 ABTB1Q969K4 478 aaPredicted RBP17.29■□□□□ 0.36
SH3D21-203ENST00000480549 OLFM3Q96PB7 478 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 QKIQ96PU8 341 aaKnown RBP eCLIP17.29■□□□□ 0.36
SH3D21-203ENST00000480549 RAB6BQ9NRW1 208 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 RGS18Q9NS28 235 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 TMLHEQ9NVH6 421 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 RABGEF1Q9UJ41 708 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 SYNJ2BP-COX16A0A087WUM0 186 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 MOXD2PA6NHM9 499 aa17.29■□□□□ 0.36
SH3D21-203ENST00000480549 TRPA1O75762 1119 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms