RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SIX4Q9UIU6 781 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 AGO2Q9UKV8 859 aaKnown RBP12.46□□□□□ -0.41
USP11-208ENST00000480104 VPS4AQ9UN37 437 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 CA5BQ9Y2D0 317 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 NME7Q9Y5B8 376 aa12.46□□□□□ -0.41
USP11-208ENST00000480104 RP1P56715 2156 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 NPHP3-ACAD11A0A0J9YXS1 232 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 K7ENM7 598 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 CDKL5O76039 1030 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 STC2O76061 302 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 DDAH2O95865 285 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 KLKB1P03952 638 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 PRF1P14222 555 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 WARSP23381 471 aaKnown RBP12.45□□□□□ -0.42
USP11-208ENST00000480104 ESPL1Q14674 2120 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 DRAP1Q14919 205 aaPredicted RBP12.45□□□□□ -0.42
USP11-208ENST00000480104 CST6Q15828 149 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 RAB11FIP2Q7L804 512 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 B3GNT8Q7Z7M8 397 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 GALNT11Q8NCW6 608 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 OR14C36Q8NHC7 312 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 TPCN2Q8NHX9 752 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 KCNB2Q92953 911 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 OMDQ99983 421 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 B3GNT5Q9BYG0 378 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 DPEP3Q9H4B8 488 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 SYNDIG1Q9H7V2 258 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 EPB41L5Q9HCM4 733 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 KLHL11Q9NVR0 708 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 DONSONQ9NYP3 566 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 IL37Q9NZH6 218 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 ITGA11Q9UKX5 1188 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 TPX2Q9ULW0 747 aaKnown RBP12.45□□□□□ -0.42
USP11-208ENST00000480104 SVILO95425 2214 aa12.45□□□□□ -0.42
USP11-208ENST00000480104 FAM92AA1XBS5 289 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 SCAMP1O15126 338 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 NVLO15381 856 aaKnown RBP12.44□□□□□ -0.42
USP11-208ENST00000480104 MAT2AP31153 395 aaKnown RBP12.44□□□□□ -0.42
USP11-208ENST00000480104 ATP5C1P36542 298 aaKnown RBP12.44□□□□□ -0.42
USP11-208ENST00000480104 FXR2P51116 673 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP11-208ENST00000480104 RBP5P82980 135 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 KLRB1Q12918 225 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 POM121L1PQ3SYA9 428 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 LACTB2Q53H82 288 aaPredicted RBP12.44□□□□□ -0.42
USP11-208ENST00000480104 PERM1Q5SV97 790 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 DPH6Q7L8W6 267 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 DSG4Q86SJ6 1040 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 ZC3H3Q8IXZ2 948 aaKnown RBP12.44□□□□□ -0.42
USP11-208ENST00000480104 DIS3L2Q8IYB7 885 aaKnown RBP12.44□□□□□ -0.42
USP11-208ENST00000480104 OR6B3Q8NGW1 331 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 ZNF274Q96GC6 653 aaPredicted RBP12.44□□□□□ -0.42
USP11-208ENST00000480104 DUSP23Q9BVJ7 150 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 OSER1Q9NX31 292 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 ARHGAP20Q9P2F6 1191 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 LARSQ9P2J5 1176 aaKnown RBP12.44□□□□□ -0.42
USP11-208ENST00000480104 PISDQ9UG56 409 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 NUDT5Q9UKK9 219 aa12.44□□□□□ -0.42
USP11-208ENST00000480104 PRAMEF33A0A0G2JMD5 474 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 PRR19A6NJB7 356 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 PP2D1A8MPX8 630 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 PRAMEF10O60809 474 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 DIAPH2O60879 1101 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 PTPN1P18031 435 aaKnown RBP12.43□□□□□ -0.42
USP11-208ENST00000480104 HLA-FP30511 346 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 CHKAP35790 457 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
USP11-208ENST00000480104 KCNMA1Q12791 1236 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 EIF3IQ13347 325 aaKnown RBP12.43□□□□□ -0.42
USP11-208ENST00000480104 STAT4Q14765 748 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 ZNF174Q15697 407 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 ZCCHC8Q6NZY4 707 aaKnown RBP12.43□□□□□ -0.42
USP11-208ENST00000480104 SV2AQ7L0J3 742 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 HEATR4Q86WZ0 1026 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 DTX1Q86Y01 620 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 FAM114A1Q8IWE2 563 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 AADATQ8N5Z0 425 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 KLHDC7BQ96G42 594 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 MRPL45Q9BRJ2 306 aaKnown RBP12.43□□□□□ -0.42
USP11-208ENST00000480104 SLC2A11Q9BYW1 496 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 MTMR12Q9C0I1 747 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 CASS4Q9NQ75 786 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 TLR8Q9NR97 1041 aaKnown RBP12.43□□□□□ -0.42
USP11-208ENST00000480104 FOXJ2Q9P0K8 574 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 PCDHB11Q9Y5F2 797 aa12.43□□□□□ -0.42
USP11-208ENST00000480104 EME2A4GXA9 379 aaPredicted RBP12.42□□□□□ -0.42
USP11-208ENST00000480104 NEMP2A6NFY4 417 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 RNASEH1O60930 286 aaKnown RBP12.42□□□□□ -0.42
USP11-208ENST00000480104 SIN3BO75182 1162 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 CYBBP04839 570 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 DLDP09622 509 aaKnown RBP12.42□□□□□ -0.42
USP11-208ENST00000480104 PSMD8P48556 350 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 SPIDRQ14159 915 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 CHST9Q7L1S5 443 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 PRPF39Q86UA1 669 aaKnown RBP12.42□□□□□ -0.42
USP11-208ENST00000480104 ADIPOR2Q86V24 386 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 MMAAQ8IVH4 418 aaKnown RBP12.42□□□□□ -0.42
USP11-208ENST00000480104 WFIKKN2Q8TEU8 576 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 DDI1Q8WTU0 396 aa12.42□□□□□ -0.42
USP11-208ENST00000480104 CACTINQ8WUQ7 758 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms