RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 PSMA2P25787 234 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 ADRA1BP35368 520 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 AIF1P55008 147 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 HDAC4P56524 1084 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 KDSRQ06136 332 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
ATG4B-219ENST00000479941 C10orf76Q5T2E6 689 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 SH3PXD2AQ5TCZ1 1133 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 TTC39BQ5VTQ0 682 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-219ENST00000479941 MAMSTRQ6ZN01 415 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 H2AFVQ71UI9 128 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 TMTC1Q8IUR5 882 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 LGI2Q8N0V4 545 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 DTWD2Q8NBA8 298 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 KCNV2Q8TDN2 545 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 CTNNBL1Q8WYA6 563 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-219ENST00000479941 EZH1Q92800 747 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-219ENST00000479941 NTAN1Q96AB6 310 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 PRICKLE1Q96MT3 831 aaPredicted RBP11.2□□□□□ -0.62
ATG4B-219ENST00000479941 NCAPGQ9BPX3 1015 aa11.2□□□□□ -0.62
ATG4B-219ENST00000479941 CACNA1HO95180 2353 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 GOLGA6L3A6NEY3 463 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 CHURC1-FNTBB4DL54 471 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 I6L893 689 aaPredicted RBP11.19□□□□□ -0.62
ATG4B-219ENST00000479941 TRIM24O15164 1050 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 RNF40O75150 1001 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 RNF8O76064 485 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 TMEM253P0C7T8 217 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 CYLC1P35663 651 aaPredicted RBP11.19□□□□□ -0.62
ATG4B-219ENST00000479941 SGSHP51688 502 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 RPS24P62847 133 aaKnown RBP11.19□□□□□ -0.62
ATG4B-219ENST00000479941 OGDHQ02218 1023 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 MESP2Q0VG99 397 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 MTAPQ13126 283 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 ACAP1Q15027 740 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 C5orf22Q49AR2 442 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 RAB6CQ53S08 254 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 FBXL22Q6P050 247 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 LRRC31Q6UY01 552 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 MFN1Q8IWA4 741 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 SPEM1Q8N4L4 309 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 FIBINQ8TAL6 211 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 RPRD1AQ96P16 312 aaPredicted RBP11.19□□□□□ -0.62
ATG4B-219ENST00000479941 NUP85Q9BW27 656 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 SIK2Q9H0K1 926 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 RAB6CQ9H0N0 254 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 OSBPL2Q9H1P3 480 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 KCNH6Q9H252 994 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 ANLNQ9NQW6 1124 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 SPTLC3Q9NUV7 552 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 SPATA6Q9NWH7 488 aaPredicted RBP11.19□□□□□ -0.62
ATG4B-219ENST00000479941 STIM2Q9P246 746 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 UVRAGQ9P2Y5 699 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 LCMT1Q9UIC8 334 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 VANGL2Q9ULK5 521 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 CLEC4EQ9ULY5 219 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 STARD13Q9Y3M8 1113 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 MUC6Q6W4X9 2439 aa11.19□□□□□ -0.62
ATG4B-219ENST00000479941 DMDP11532 3685 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 A0A1B0GVM2 712 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 TCAF2A6NFQ2 919 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 MYO1FO00160 1098 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 GALR2O43603 387 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 CLDN11O75508 207 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 LUC7L3O95232 432 aaKnown RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 LCA5LO95447 670 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 FECHP22830 423 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 HLA-FP30511 346 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 CCR3P51677 355 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 GSDMDP57764 484 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 MRPS21P82921 87 aaKnown RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 NRG1Q02297 640 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 SCAPQ12770 1279 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 CDH18Q13634 790 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 GAS6Q14393 721 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 PIGHQ14442 188 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 EIF4HQ15056 248 aaKnown RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 E2F5Q15329 346 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 HSF5Q4G112 596 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 SCYL2Q6P3W7 929 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 Q6ZS52 159 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 CHST9Q7L1S5 443 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 TRMT11Q7Z4G4 463 aaKnown RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 ANKS1BQ7Z6G8 1248 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 SLFN11Q7Z7L1 901 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 C14orf80Q86SX3 495 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 C1orf210Q8IVY1 113 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 CFAP52Q8N1V2 620 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 CARNMT1Q8N4J0 409 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 SPC24Q8NBT2 197 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 ZNF564Q8TBZ8 553 aaPredicted RBP11.18□□□□□ -0.62
ATG4B-219ENST00000479941 WFIKKN2Q8TEU8 576 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 IGSF8Q969P0 613 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 ACDQ96AP0 544 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 ARHGEF26Q96DR7 871 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 MYEOVQ96EZ4 313 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 PACSIN1Q9BY11 444 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 TRIM7Q9C029 511 aa11.18□□□□□ -0.62
ATG4B-219ENST00000479941 GRPEL1Q9HAV7 217 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms