RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 HOXA4Q00056 320 aaPredicted RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 ROR2Q01974 943 aaKnown RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 RAPGEF1Q13905 1077 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 IQCB1Q15051 598 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 CNGA2Q16280 664 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 SLC4A8Q2Y0W8 1093 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 TTC22Q5TAA0 569 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 SLC30A9Q6PML9 568 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 APOA5Q6Q788 366 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 ZNF783Q6ZMS7 281 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 ZNF804AQ7Z570 1209 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 IRF2BP2Q7Z5L9 587 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC83Q8IWF9 413 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 SVIPQ8NHG7 77 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 IL31RAQ8NI17 732 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 FAM76AQ8TAV0 307 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 HDAC7Q8WUI4 952 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 C17orf50Q8WW18 174 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 JAKMIP2Q96AA8 810 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 BICD1Q96G01 975 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 TNIP3Q96KP6 325 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 GDAP1L1Q96MZ0 367 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 SLC46A1Q96NT5 459 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 ALS2CR12Q96Q35 445 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 BPIFA3Q9BQP9 254 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 MMTAG2Q9BU76 263 aaKnown RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 FUT8Q9BYC5 575 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 RANBP17Q9H2T7 1088 aaKnown RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 EBF3Q9H4W6 596 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 UTP6Q9NYH9 597 aaKnown RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 MYO1AQ9UBC5 1043 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 LCMT1Q9UIC8 334 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 HOOK1Q9UJC3 728 aaKnown RBP4.37□□□□□ -1.71
CMSS1-204ENST00000479555 CFAP45Q9UL16 551 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 RAB21Q9UL25 225 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 ADAMTS5Q9UNA0 930 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 SSX2IPQ9Y2D8 614 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 MED16Q9Y2X0 877 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 TTC21BQ7Z4L5 1316 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 MED14O60244 1454 aa4.37□□□□□ -1.71
CMSS1-204ENST00000479555 CDK13Q14004 1512 aaKnown RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 KIAA0556O60303 1618 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CACNA1IQ9P0X4 2223 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CYP2D7A0A087X1C5 515 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 TMEM232C9JQI7 657 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 PMM2O15305 246 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 SLC16A3O15427 465 aaKnown RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 INSIG1O15503 277 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 TBC1D4O60343 1298 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 EN2P19622 333 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 DEUP1Q05D60 604 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 EXOSC9Q06265 439 aaKnown RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 TCF15Q12870 199 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 ANKRD1Q15327 319 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC40Q4G0X9 1142 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 TEDDM1Q5T9Z0 273 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 ARHGAP40Q5TG30 622 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 PXDC1Q5TGL8 231 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 WDR93Q6P2C0 686 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 TRIM72Q6ZMU5 477 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC80Q76M96 950 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 TRIM74Q86UV6 250 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 TRIM73Q86UV7 250 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 DTX2Q86UW9 622 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 MORC1Q86VD1 984 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 SESTD1Q86VW0 696 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 FAM114A1Q8IWE2 563 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC65Q8IXS2 484 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 RPAP2Q8IXW5 612 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 EXOC8Q8IYI6 725 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 C17orf53Q8N3J3 647 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 ARFGAP2Q8N6H7 521 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 SAMD3Q8N6K7 520 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 PCSK9Q8NBP7 692 aaKnown RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 MSANTD4Q8NCY6 345 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CNNM3Q8NE01 707 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 ACRBPQ8NEB7 543 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CCDC148Q8NFR7 591 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CFAP61Q8NHU2 1237 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 FAM81AQ8TBF8 368 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 ATG4AQ8WYN0 398 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 GLG1Q92896 1179 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 NT5C1BQ96P26 610 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 MOGAT1Q96PD6 335 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 RUFY1Q96T51 708 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 NAA15Q9BXJ9 866 aaKnown RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 FSD1LQ9BXM9 530 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 ADGRE3Q9BY15 652 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 API5Q9BZZ5 524 aaKnown RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 RABEP2Q9H5N1 569 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.36□□□□□ -1.71
CMSS1-204ENST00000479555 STK26Q9P289 416 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 DAAM1Q9Y4D1 1078 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 PLEKHM1Q9Y4G2 1056 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 PCDHGB6Q9Y5F9 930 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 SNX13Q9Y5W8 968 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 GMEB1Q9Y692 573 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 FAM169AQ9Y6X4 670 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 WDR17Q8IZU2 1322 aa4.36□□□□□ -1.71
CMSS1-204ENST00000479555 NSD2O96028 1365 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms