RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 NUGGCQ68CJ6 796 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 FOXR2Q6PJQ5 311 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 LAYNQ6UX15 382 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 UNC45BQ8IWX7 931 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 LGI2Q8N0V4 545 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 SLC4A5Q9BY07 1137 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 C6orf106Q9H6K1 298 aaPredicted RBP18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 SIX2Q9NPC8 291 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 EIF2B4Q9UI10 523 aaKnown RBP18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 DOCK9Q9BZ29 2069 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 AKAP13Q12802 2813 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 CACNA1BQ00975 2339 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 ARHGAP33O14559 1287 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 FGFR1OPO95684 399 aaKnown RBP18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 LATS1O95835 1130 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 POLR2EP19388 210 aaKnown RBP18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 PON1P27169 355 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 ACSL1P33121 698 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 CSKP41240 450 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 PDCLQ13371 301 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 TPD52L1Q16890 204 aaPredicted RBP18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 DPCR1Q3MIW9 517 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 DCAF6Q58WW2 860 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 GBP6Q6ZN66 633 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 CHSY1Q86X52 802 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 AHI1Q8N157 1196 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 WDTC1Q8N5D0 677 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 C1orf131Q8NDD1 294 aaKnown RBP18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 OR2T3Q8NH03 318 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 WFIKKN2Q8TEU8 576 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 SLC39A13Q96H72 371 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 SERPINB11Q96P15 392 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 CPXM1Q96SM3 734 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 LHX5Q9H2C1 402 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 TMEM245Q9H330 911 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 IL21RQ9HBE5 538 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 PRSS16Q9NQE7 514 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 ASPMQ8IZT6 3477 aa18.04■□□□□ 0.48
ECHDC1-216ENST00000479525 KMT2BQ9UMN6 2715 aaPredicted RBP18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 TRUB2O95900 331 aaKnown RBP18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 RPL34P49207 117 aaKnown RBP18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 GRIK2Q13002 908 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 CAMK2GQ13555 558 aaPredicted RBP18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 EXOC3L4Q17RC7 722 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 MS4A13Q5J8X5 152 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 KIAA0907Q7Z7F0 614 aaPredicted RBP18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 DHX40Q8IX18 779 aaKnown RBP18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 HDDC3Q8N4P3 179 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 HJURPQ8NCD3 748 aaPredicted RBP18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 CEP76Q8TAP6 659 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 MYO19Q96H55 970 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 LMLNQ96KR4 655 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 CHMP5Q9NZZ3 219 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 APEX2Q9UBZ4 518 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 PLA2G4CQ9UP65 541 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 TLR6Q9Y2C9 796 aa18.03■□□□□ 0.48
ECHDC1-216ENST00000479525 C1QTNF9BB2RNN3 333 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 IRAK2O43187 625 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 MED7O43513 233 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 OPHN1O60890 802 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 C1QTNF9P0C862 333 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 TACR2P21452 398 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 STK19P49842 368 aaPredicted RBP18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 IRAK1P51617 712 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 RPS14P62263 151 aaKnown RBP18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 RING1Q06587 406 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 SYCP2LQ5T4T6 812 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 OR6B2Q6IFH4 312 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 FAM183BPQ6ZVS7 135 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 APCDD1Q8J025 514 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 DEFB106AQ8N104 65 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 RPL10LQ96L21 214 aaKnown RBP18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 CLSTN2Q9H4D0 955 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 FAM204AQ9H8W3 233 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 DNAJC12Q9UKB3 198 aa18.02■□□□□ 0.47
ECHDC1-216ENST00000479525 TTC34A8MYJ7 566 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 PES1O00541 588 aaKnown RBP18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 NPC1O15118 1278 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 HYAL3O43820 417 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 SH3BP5O60239 455 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 SIN3BO75182 1162 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 ERBB2P04626 1255 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 DLDP09622 509 aaKnown RBP18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 CEACAM1P13688 526 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 CD59P13987 128 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 PRKCSHP14314 528 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 CSRP1P21291 193 aaKnown RBP18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 ACADSBP45954 432 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 SIM1P81133 766 aaPredicted RBP18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 BNC1Q01954 994 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 CENPCQ03188 943 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 SEMA3BQ13214 749 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 CDH18Q13634 790 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 PITRM1Q5JRX3 1037 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 WDR45BQ5MNZ6 344 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 SLC47A2Q86VL8 602 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 SHC3Q92529 594 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 FOXJ1Q92949 421 aa18.01■□□□□ 0.47
ECHDC1-216ENST00000479525 MRGPRX3Q96LB0 322 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms