RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 NFRKBQ6P4R8 1299 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 PTCHD4Q6ZW05 846 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 Q6ZWC4 215 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 ZNF804AQ7Z570 1209 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 ABHD11Q8NFV4 315 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 WDYHV1Q96HA8 205 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 ABHD8Q96I13 439 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 PRR25Q96S07 402 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 PAAF1Q9BRP4 392 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 TOR3AQ9H497 397 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 FSCN3Q9NQT6 498 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 SNX15Q9NRS6 342 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 DUSP22Q9NRW4 184 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 SRP68Q9UHB9 627 aaKnown RBP5.68□□□□□ -1.5
RFC4-212ENST00000479307 USP54Q70EL1 1684 aa5.68□□□□□ -1.5
RFC4-212ENST00000479307 KIF13BQ9NQT8 1826 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 PIK3C2GO75747 1445 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 GXYLT2A0PJZ3 443 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 EFCAB8A8MWE9 144 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 SPRY2O43597 315 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 FAM155BO75949 473 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 LMNAP02545 664 aaKnown RBP5.67□□□□□ -1.5
RFC4-212ENST00000479307 MYCLP12524 364 aaPredicted RBP5.67□□□□□ -1.5
RFC4-212ENST00000479307 CREB1P16220 341 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 TNFRSF1AP19438 455 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 CTGFP29279 349 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 AKT1P31749 480 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 ADRA1BP35368 520 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 PBX1P40424 430 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 CDK7P50613 346 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 E2F1Q01094 437 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 TIGD6Q17RP2 521 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 ZXDCQ2QGD7 858 aaPredicted RBP5.67□□□□□ -1.5
RFC4-212ENST00000479307 AASDHQ4L235 1098 aaPredicted RBP5.67□□□□□ -1.5
RFC4-212ENST00000479307 TMEM63BQ5T3F8 832 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 MSANTD2Q6P1R3 559 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 TRABD2AQ86V40 505 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 VRK3Q8IV63 474 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 SPPL3Q8TCT6 385 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 LARP4BQ92615 738 aaKnown RBP5.67□□□□□ -1.5
RFC4-212ENST00000479307 RUBCNQ92622 972 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 SDCCAG3Q96C92 435 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 PDLIM2Q96JY6 352 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 EIF3CQ99613 913 aaKnown RBP5.67□□□□□ -1.5
RFC4-212ENST00000479307 FSD1LQ9BXM9 530 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 DLL3Q9NYJ7 618 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 KIF17Q9P2E2 1029 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 AMFRQ9UKV5 643 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 UBE2J1Q9Y385 318 aaPredicted RBP5.67□□□□□ -1.5
RFC4-212ENST00000479307 KAT6AQ92794 2004 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 ROCK1Q13464 1354 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 PLEKHG2Q9H7P9 1386 aa5.67□□□□□ -1.5
RFC4-212ENST00000479307 BRCA1P38398 1863 aaKnown RBP5.66□□□□□ -1.5
RFC4-212ENST00000479307 CES2O00748 559 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 CTIFO43310 598 aaKnown RBP5.66□□□□□ -1.5
RFC4-212ENST00000479307 GYS1P13807 737 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 INSRRP14616 1297 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 JUPP14923 745 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 TACR2P21452 398 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 DRD1P21728 446 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 MMP8P22894 467 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 KLRK1P26718 216 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 CYP2C18P33260 490 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 PNLIPRP1P54315 467 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 EEFSECP57772 596 aaKnown RBP5.66□□□□□ -1.5
RFC4-212ENST00000479307 FOXI1Q12951 378 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 SEMA3BQ13214 749 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 ZNF169Q14929 603 aaPredicted RBP5.66□□□□□ -1.5
RFC4-212ENST00000479307 P3H1Q32P28 736 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 ADCK5Q3MIX3 580 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 AARS2Q5JTZ9 985 aaKnown RBP5.66□□□□□ -1.5
RFC4-212ENST00000479307 HECTD2Q5U5R9 776 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 FAM90A2PQ658T7 463 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 IGFL4Q6B9Z1 124 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 CCDC144NLQ6NUI1 221 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 DPY19L3Q6ZPD9 716 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 PIK3AP1Q6ZUJ8 805 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 SFTPA1Q8IWL2 248 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 AMER2Q8N7J2 671 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 PNPLA1Q8N8W4 532 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 BEND2Q8NDZ0 799 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 OR1N1Q8NGS0 311 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 SCAMP5Q8TAC9 235 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 THAP4Q8WY91 577 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 TBC1D5Q92609 795 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 FAM167BQ9BTA0 163 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 MLXIPQ9HAP2 919 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 FOXJ2Q9P0K8 574 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 STK26Q9P289 416 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 MGAT4CQ9UBM8 478 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 GTF2A1LQ9UNN4 478 aa5.66□□□□□ -1.5
RFC4-212ENST00000479307 C19orf53Q9UNZ5 99 aaPredicted RBP5.66□□□□□ -1.5
RFC4-212ENST00000479307 VIRMAQ69YN4 1812 aaKnown RBP5.66□□□□□ -1.5
RFC4-212ENST00000479307 EIF3AQ14152 1382 aaKnown RBP5.66□□□□□ -1.5
RFC4-212ENST00000479307 KCPQ6ZWJ8 1503 aa5.65□□□□□ -1.5
RFC4-212ENST00000479307 FAM90A18PA6NE21 464 aa5.65□□□□□ -1.5
RFC4-212ENST00000479307 FAM90A16PA6NEW6 464 aa5.65□□□□□ -1.5
RFC4-212ENST00000479307 FAM90A9PA6NNJ1 464 aa5.65□□□□□ -1.5
RFC4-212ENST00000479307 LINC00473A8K010 186 aa5.65□□□□□ -1.5
RFC4-212ENST00000479307 FAM90A5PA8MXJ8 464 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms