RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MAGEC3Q8TD91 643 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 MGARPQ8TDB4 240 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ASB11Q8WXH4 323 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 MAML1Q92585 1016 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 C9orf72Q96LT7 481 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 TGS1Q96RS0 853 aaKnown RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 TRIM56Q9BRZ2 755 aaKnown RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 NFKBIZQ9BYH8 718 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 MIS12Q9H081 205 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 XYLT2Q9H1B5 865 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CDT1Q9H211 546 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 R3HDMLQ9H3Y0 253 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 SMARCAD1Q9H4L7 1026 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PIF1Q9H611 641 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 LIN7BQ9HAP6 207 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CYP3A43Q9HB55 503 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PTPRHQ9HD43 1115 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PRMT7Q9NVM4 692 aaPredicted RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 DNAJC17Q9NVM6 304 aaKnown RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 KLHL11Q9NVR0 708 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 HAUS2Q9NVX0 235 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 CTNNAL1Q9UBT7 734 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 FZD1Q9UP38 647 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 SLC12A4Q9UP95 1085 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 SMG5Q9UPR3 1016 aaKnown RBP5.15□□□□□ -1.59
SF3B6-202ENST00000478050 AGTPBP1Q9UPW5 1226 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 TNFSF13BQ9Y275 285 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 ARL2BPQ9Y2Y0 163 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 PTCH2Q9Y6C5 1203 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 COL1A2P08123 1366 aa5.15□□□□□ -1.59
SF3B6-202ENST00000478050 DNAJC25-GNG10A0A024R161 153 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 A0A1B0GUA9 196 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 RASA4BC9J798 803 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ADM5C9JUS6 153 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 GOLGA8SH3BPF8 625 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 INO80B-WBP1J3KQ70 363 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 SGK1O00141 431 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 MCF2LO15068 1137 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 MAGEB2O15479 319 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 RASA4O43374 803 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ATP2C2O75185 946 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 FBXO24O75426 580 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 LRCH4O75427 683 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 LEFTY1O75610 366 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 CNMDO75829 334 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ARIH2O95376 493 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 MCF2P10911 925 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 VDRP11473 427 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 CETPP11597 493 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 KRT3P12035 628 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 TCF4P15884 667 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 PECAM1P16284 738 aaPredicted RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ATF4P18848 351 aaPredicted RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 TAC1P20366 129 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 KDELR1P24390 212 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 MARK3P27448 753 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 NF2P35240 595 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 SKIV2L2P42285 1042 aaKnown RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 GABRB2P47870 512 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 GRIA4P48058 902 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 GJA8P48165 433 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 RAD23BP54727 409 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 OXCT1P55809 520 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ARL4CP56559 192 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 PSMC1P62191 440 aaKnown RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 OTUD4Q01804 1114 aaKnown RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 SP3Q02447 781 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 SLC25A11Q02978 314 aaKnown RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 MBTD1Q05BQ5 628 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 PTPN11Q06124 597 aaPredicted RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 CCDC15Q0P6D6 951 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 PDIA2Q13087 525 aaKnown RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ACVR2BQ13705 512 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 PRKG1Q13976 671 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 SPARCL1Q14515 664 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 TTLL4Q14679 1199 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 KCTD2Q14681 263 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 LRRC14Q15048 493 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 CCDC85BQ15834 202 aaPredicted RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 LY6KQ17RY6 165 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 KLHL38Q2WGJ6 581 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 PTPN20Q4JDL3 420 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ATP13A4Q4VNC1 1196 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 CYP4A22Q5TCH4 519 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 WDR78Q5VTH9 848 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 EEF1DP3Q658K8 133 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 CCDC62Q6P9F0 684 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 CYB5D1Q6P9G0 228 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 SCARA5Q6ZMJ2 495 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 RGS9BPQ6ZS82 235 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 TRABD2AQ86V40 505 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 XYLT1Q86Y38 959 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ERO1BQ86YB8 467 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 RHPN2Q8IUC4 686 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 CCNJLQ8IV13 435 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 PPIL6Q8IXY8 311 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 DHX37Q8IY37 1157 aaKnown RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 SRRM1Q8IYB3 904 aaKnown RBP5.14□□□□□ -1.59
SF3B6-202ENST00000478050 LRRC71Q8N4P6 559 aa5.14□□□□□ -1.59
SF3B6-202ENST00000478050 ATP11CQ8NB49 1132 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms