RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 CLDN5O00501 218 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 FCHO1O14526 889 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 ADAMTS4O75173 837 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 NEFHP12036 1026 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 MAGEA6P43360 314 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 KPNB1Q14974 876 aaKnown RBP17.75■□□□□ 0.43
LINC00336-201ENST00000477984 DBN1Q16643 649 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 MDH1BQ5I0G3 518 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 KIAA0319Q5VV43 1072 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 CLEC20AQ6ZU45 233 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 BNIPLQ7Z465 357 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 CCDC185Q8N715 623 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 IFT43Q96FT9 208 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 CSPG4P5Q96PW8 444 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 SYT15Q9BQS2 421 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 LRRC4Q9HBW1 653 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 ARHGEF4Q9NR80 690 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC00336-201ENST00000477984 MIOSQ9NXC5 875 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 DDX43Q9NXZ2 648 aaKnown RBP17.75■□□□□ 0.43
LINC00336-201ENST00000477984 RCOR3Q9P2K3 495 aaPredicted RBP17.75■□□□□ 0.43
LINC00336-201ENST00000477984 FZD10Q9ULW2 581 aa17.75■□□□□ 0.43
LINC00336-201ENST00000477984 CAPN14A8MX76 684 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 FAM200BP0CF97 657 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 SP100P23497 879 aaPredicted RBP17.74■□□□□ 0.43
LINC00336-201ENST00000477984 IGFBP6P24592 240 aaPredicted RBP17.74■□□□□ 0.43
LINC00336-201ENST00000477984 RPL9P32969 192 aaKnown RBP17.74■□□□□ 0.43
LINC00336-201ENST00000477984 NOS2P35228 1153 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 FLT3LGP49771 235 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 SULT1E1P49888 294 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 FAAP100Q0VG06 881 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 PPFIBP2Q8ND30 876 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 NRG4Q8WWG1 115 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 NT5C3BQ969T7 300 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 FAM111AQ96PZ2 611 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 SLC2A13Q96QE2 648 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 MED10Q9BTT4 135 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 CRTAC1Q9NQ79 661 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 CHMP2BQ9UQN3 213 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 ARL5CA6NH57 179 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 GOLGA8RI6L899 631 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 BEST1O76090 585 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 BGNP21810 368 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 CLCNKBP51801 687 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 YWHAZP63104 245 aaKnown RBP17.74■□□□□ 0.43
LINC00336-201ENST00000477984 KBTBD12Q3ZCT8 623 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 LGSNQ5TDP6 509 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 ATG16L1Q676U5 607 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 AGMOQ6ZNB7 445 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 NET1Q7Z628 596 aaPredicted RBP17.74■□□□□ 0.43
LINC00336-201ENST00000477984 IGDCC3Q8IVU1 814 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 SCG3Q8WXD2 468 aaKnown RBP17.74■□□□□ 0.43
LINC00336-201ENST00000477984 STMN2Q93045 179 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 LPPQ93052 612 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 FAM149B1Q96BN6 582 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 TRAPPC9Q96Q05 1148 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 CCDC28BQ9BUN5 200 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 RAB6BQ9NRW1 208 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 USP3Q9Y6I4 520 aa17.74■□□□□ 0.43
LINC00336-201ENST00000477984 KBTBD13C9JR72 458 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 COPEO14579 308 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 CAPN9O14815 690 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 TBX10O75333 385 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 KRT36O76013 467 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 KRT37O76014 449 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 FBXO21O94952 628 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 SNRPAP09012 282 aaKnown RBP17.73■□□□□ 0.43
LINC00336-201ENST00000477984 MYL2P10916 166 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 PRKCHP24723 683 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 AFF1P51825 1210 aaKnown RBP17.73■□□□□ 0.43
LINC00336-201ENST00000477984 MXRA7P84157 204 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 OTUD1Q5VV17 481 aaPredicted RBP17.73■□□□□ 0.43
LINC00336-201ENST00000477984 OR52E8Q6IFG1 317 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 TMEM154Q6P9G4 183 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 CCDC110Q8TBZ0 833 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 ZFAND2BQ8WV99 257 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 LRRC39Q96DD0 335 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 NPY6RQ99463 290 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 KLF6Q99612 283 aaPredicted RBP17.73■□□□□ 0.43
LINC00336-201ENST00000477984 YIPF3Q9GZM5 350 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 KLC2Q9H0B6 622 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 AGO3Q9H9G7 860 aaKnown RBP17.73■□□□□ 0.43
LINC00336-201ENST00000477984 FBXO6Q9NRD1 293 aaPredicted RBP17.73■□□□□ 0.43
LINC00336-201ENST00000477984 SIRPGQ9P1W8 387 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 ANGPTL2Q9UKU9 493 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 SORCS3Q9UPU3 1222 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 PLLPQ9Y342 182 aa17.73■□□□□ 0.43
LINC00336-201ENST00000477984 ZNF623O75123 536 aa17.72■□□□□ 0.43
LINC00336-201ENST00000477984 PYGBP11216 843 aa17.72■□□□□ 0.43
LINC00336-201ENST00000477984 GBE1Q04446 702 aa17.72■□□□□ 0.43
LINC00336-201ENST00000477984 SIX6OS1Q8N1H7 587 aa17.72■□□□□ 0.43
LINC00336-201ENST00000477984 KLHDC9Q8NEP7 349 aa17.72■□□□□ 0.43
LINC00336-201ENST00000477984 NDRG1Q92597 394 aaKnown RBP17.72■□□□□ 0.43
LINC00336-201ENST00000477984 TTC17Q96AE7 1141 aa17.72■□□□□ 0.43
LINC00336-201ENST00000477984 MTBPQ96DY7 904 aa17.72■□□□□ 0.43
LINC00336-201ENST00000477984 QKIQ96PU8 341 aaKnown RBP eCLIP17.72■□□□□ 0.43
LINC00336-201ENST00000477984 NR1H4Q96RI1 486 aaPredicted RBP17.72■□□□□ 0.43
LINC00336-201ENST00000477984 SRPK1Q96SB4 655 aaKnown RBP17.72■□□□□ 0.43
LINC00336-201ENST00000477984 SIKE1Q9BRV8 207 aa17.72■□□□□ 0.43
LINC00336-201ENST00000477984 C1orf21Q9H246 121 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms