RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 ZNF131P52739 623 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 GALCP54803 685 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 INHBCP55103 352 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 IGFBP7Q16270 282 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 HS1BP3Q53T59 392 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 NCEH1Q6PIU2 408 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 FOXR1Q6PIV2 292 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 IGF2-ASQ6U949 168 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 SASS6Q6UVJ0 657 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 Q6ZNB5 142 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 TMC6Q7Z403 805 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 GPBP1Q86WP2 473 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 ELOA2Q8IYF1 753 aaPredicted RBP10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 FAM26EQ8N5C1 309 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 NOC3LQ8WTT2 800 aaKnown RBP10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 SERAC1Q96JX3 654 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 FIZ1Q96SL8 496 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 SEMA3CQ99985 751 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 ABCG4Q9H172 646 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 TMEM245Q9H330 911 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 ERVMER34-1Q9H9K5 563 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 PRSS16Q9NQE7 514 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
SMARCB1-206ENST00000477836 CELSR2Q9HCU4 2923 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 A0A1B0GVM2 712 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 A0A1W2PNU3 283 aaPredicted RBP10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 FAM92AA1XBS5 289 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 MDM4O15151 490 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 PPFIA2O75334 1257 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 SMC2O95347 1197 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 GJB6O95452 261 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 ITGB2P05107 769 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 KRT18P05783 430 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 MYL1P05976 194 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 PNOCQ13519 176 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 KCNJ12Q14500 433 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 SLC45A4Q5BKX6 768 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 SPATS2Q86XZ4 545 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 GRAMD1CQ8IYS0 662 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 KCTD17Q8N5Z5 321 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 CYB5D2Q8WUJ1 264 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 LARP4BQ92615 738 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 RAD54LQ92698 747 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 SGF29Q96ES7 293 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 PAGE5Q96GU1 130 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 LIN37Q96GY3 246 aaPredicted RBP10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 ANKRD36BP1Q96IX9 119 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 MED10Q9BTT4 135 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 FBRSQ9HAH7 460 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 PDE11AQ9HCR9 933 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 TLR8Q9NR97 1041 aaKnown RBP10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 FBXL12Q9NXK8 326 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 IL37Q9NZH6 218 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 NUDT5Q9UKK9 219 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 PLA2G4CQ9UP65 541 aa10.16□□□□□ -0.78
SMARCB1-206ENST00000477836 GOLGA8IPA6NC78 632 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 LRRC72A6NJI9 287 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 GOLGA8JA6NMD2 632 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 A8MXQ7 604 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 TIMM44O43615 452 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 TBCAO75347 108 aaKnown RBP10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 CYBBP04839 570 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 PRR29P0C7W0 189 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 C7P10643 843 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 CHKAP35790 457 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 PLA2G4AP47712 749 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 FOXK1P85037 733 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 AMPD3Q01432 767 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 TYRO3Q06418 890 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 STX1AQ16623 288 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 ISXQ2M1V0 245 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 ZNF776Q68DI1 518 aaPredicted RBP10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 USP30Q70CQ3 517 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 PTRH1Q86Y79 214 aaKnown RBP10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 B3GALNT2Q8NCR0 500 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 OR5B17Q8NGF7 314 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 GOLGA1Q92805 767 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 SMARCE1Q969G3 411 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 ATXN7L3BQ96GX2 97 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 PRR11Q96HE9 360 aaPredicted RBP10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 LRRC27Q9C0I9 530 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 SLC25A18Q9H1K4 315 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 EPN3Q9H201 632 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 TSPY26PQ9H489 355 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 DMAP1Q9NPF5 467 aaPredicted RBP10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 CYLDQ9NQC7 956 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 COMMD8Q9NX08 183 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 OSER1Q9NX31 292 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 KIAA1468Q9P260 1216 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 SERGEFQ9UGK8 458 aa10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 ATXN7L1Q9ULK2 861 aaPredicted RBP10.15□□□□□ -0.78
SMARCB1-206ENST00000477836 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
SMARCB1-206ENST00000477836 A0A1W2PP55 124 aa10.14□□□□□ -0.79
SMARCB1-206ENST00000477836 PMS2P1A4D2B8 440 aa10.14□□□□□ -0.79
SMARCB1-206ENST00000477836 CDRT15L2A8MXV6 281 aa10.14□□□□□ -0.79
SMARCB1-206ENST00000477836 FFAR2O15552 330 aa10.14□□□□□ -0.79
SMARCB1-206ENST00000477836 TACC1O75410 805 aa10.14□□□□□ -0.79
SMARCB1-206ENST00000477836 STC2O76061 302 aa10.14□□□□□ -0.79
SMARCB1-206ENST00000477836 PRPF6O94906 941 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms