RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 STIM2Q9P246 746 aa12.69□□□□□ -0.38
PTPN7-210ENST00000477625 XPO7Q9UIA9 1087 aaKnown RBP12.69□□□□□ -0.38
PTPN7-210ENST00000477625 MBD1Q9UIS9 605 aaPredicted RBP12.69□□□□□ -0.38
PTPN7-210ENST00000477625 ABCA7Q8IZY2 2146 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 SYNJ2BP-COX16A0A087WUM0 186 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 EPHB6O15197 1021 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 DAB1O75553 588 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 CAVIN2O95810 425 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 ATP5BP06576 529 aaKnown RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 MMEP08473 750 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 ABCB4P21439 1286 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 TACR2P21452 398 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 CD70P32970 193 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 SOX5P35711 763 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 MATKP42679 507 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 MTA1Q13330 715 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 SF3A2Q15428 464 aaKnown RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 FUT11Q495W5 492 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 ANO6Q4KMQ2 910 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 MBLAC2Q68D91 279 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 CAVIN1Q6NZI2 390 aaKnown RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 SERPINA13PQ6UXR4 307 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 SLC36A4Q6YBV0 504 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 APTXQ7Z2E3 356 aaKnown RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 MFN1Q8IWA4 741 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 CCDC117Q8IWD4 279 aaPredicted RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 CFAP52Q8N1V2 620 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 AOPEPQ8N6M6 819 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 C12orf50Q8NA57 414 aaPredicted RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 NEK11Q8NG66 645 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 WFDC5Q8TCV5 224 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 RNF34Q969K3 372 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 LMLNQ96KR4 655 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 SPAG5Q96R06 1193 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 ERGIC2Q96RQ1 377 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 RRN3Q9NYV6 651 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 COX16Q9P0S2 106 aa12.68□□□□□ -0.38
PTPN7-210ENST00000477625 NOCTQ9UK39 431 aaKnown RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 CDV3Q9UKY7 258 aaKnown RBP12.68□□□□□ -0.38
PTPN7-210ENST00000477625 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 M0QYT0 321 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 GDF9O60383 454 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 EPHX1P07099 455 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 DLDP09622 509 aaKnown RBP12.67□□□□□ -0.38
PTPN7-210ENST00000477625 ATP1A3P13637 1013 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
PTPN7-210ENST00000477625 PRKCHP24723 683 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 SCNN1AP37088 669 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 STAT1P42224 750 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 DHPSP49366 369 aaPredicted RBP12.67□□□□□ -0.38
PTPN7-210ENST00000477625 RNASE9P60153 205 aaKnown RBP12.67□□□□□ -0.38
PTPN7-210ENST00000477625 CDR2Q01850 454 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 NME3Q13232 169 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 CDH18Q13634 790 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 PTPRNQ16849 979 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 RAP1GAP2Q684P5 730 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 ERMP1Q7Z2K6 904 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 METTL3Q86U44 580 aaKnown RBP12.67□□□□□ -0.38
PTPN7-210ENST00000477625 CHSY1Q86X52 802 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 XYLT1Q86Y38 959 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 TMEFF1Q8IYR6 380 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 LGI2Q8N0V4 545 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 CARNMT1Q8N4J0 409 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 MSANTD4Q8NCY6 345 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 NETO1Q8TDF5 533 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 CYB5D2Q8WUJ1 264 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 SLC20A1Q8WUM9 679 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 CPA5Q8WXQ8 436 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 NT5C3BQ969T7 300 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 NPY6RQ99463 290 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 PRMT1Q99873 361 aaKnown RBP12.67□□□□□ -0.38
PTPN7-210ENST00000477625 MKRN2Q9H000 416 aaKnown RBP12.67□□□□□ -0.38
PTPN7-210ENST00000477625 SLC6A17Q9H1V8 727 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 TMEM245Q9H330 911 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 PRDM16Q9HAZ2 1276 aa12.67□□□□□ -0.38
PTPN7-210ENST00000477625 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPN7-210ENST00000477625 RALGAPA1Q6GYQ0 2036 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 IGHV1OR15-9A0A0B4J2B8 117 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 SMTNL1A8MU46 457 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 F5H5T6 163 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 H0Y626 953 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 AP5Z1O43299 807 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 LUC7L3O95232 432 aaKnown RBP12.66□□□□□ -0.38
PTPN7-210ENST00000477625 CYP1A1P04798 512 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-210ENST00000477625 CHRNB2P17787 502 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 PTGER3P43115 390 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 ATXN1P54253 815 aaKnown RBP12.66□□□□□ -0.38
PTPN7-210ENST00000477625 NOMO3P69849 1222 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 RPL6Q02878 288 aaKnown RBP12.66□□□□□ -0.38
PTPN7-210ENST00000477625 LMAN2Q12907 356 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 AASDHQ4L235 1098 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-210ENST00000477625 FNDC3BQ53EP0 1204 aaKnown RBP12.66□□□□□ -0.38
PTPN7-210ENST00000477625 FSCBQ5H9T9 825 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 FAM102AQ5T9C2 384 aaPredicted RBP12.66□□□□□ -0.38
PTPN7-210ENST00000477625 NAA35Q5VZE5 725 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 KIAA1324Q6UXG2 1013 aaKnown RBP12.66□□□□□ -0.38
PTPN7-210ENST00000477625 DGLUCYQ7Z3D6 616 aa12.66□□□□□ -0.38
PTPN7-210ENST00000477625 CYP2U1Q7Z449 544 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms