RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ZBTB49Q6ZSB9 765 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 RGL4Q8IZJ4 473 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 TSPAN16Q9UKR8 245 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 RALGDSQ12967 914 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 C4orf19Q8IY42 314 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 SIX5Q8N196 739 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 SAMD3Q8N6K7 520 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 ZCCHC2Q9C0B9 1178 aaKnown RBP18.99■□□□□ 0.63
VARS2-209ENST00000477288 VPS51Q9UID3 782 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 TAF6LQ9Y6J9 622 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 UBDO15205 165 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 IGSF6O95976 241 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 PKN1Q16512 942 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 FGD3Q5JSP0 725 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 SMARCD1Q96GM5 515 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 KLHL4Q9C0H6 718 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 PABPC3Q9H361 631 aaKnown RBP18.99■□□□□ 0.63
VARS2-209ENST00000477288 NCKIPSDQ9NZQ3 722 aa18.99■□□□□ 0.63
VARS2-209ENST00000477288 CCR4P51679 360 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 TROAPQ12815 778 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 SLC39A12Q504Y0 691 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 REXO1L1PQ8IX06 675 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 NAT9Q9BTE0 207 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 EPS8L2Q9H6S3 715 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 TEX28O15482 410 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 AKR1A1P14550 325 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 CXCL9Q07325 125 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 RASA2Q15283 850 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 TAF2Q6P1X5 1199 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 INTS5Q6P9B9 1019 aaKnown RBP18.98■□□□□ 0.63
VARS2-209ENST00000477288 PDCD2LQ9BRP1 358 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 TMEM79Q9BSE2 394 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 AKAP7Q9P0M2 348 aaPredicted RBP18.98■□□□□ 0.63
VARS2-209ENST00000477288 WHRNQ9P202 907 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 BARX2Q9UMQ3 279 aaPredicted RBP18.98■□□□□ 0.63
VARS2-209ENST00000477288 TMEM114B3SHH9 223 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 KPNA3O00505 521 aaPredicted RBP18.98■□□□□ 0.63
VARS2-209ENST00000477288 ADORA2AP29274 412 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 TAF13Q15543 124 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 TRIQKQ629K1 86 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 DSG4Q86SJ6 1040 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 SLC22A9Q8IVM8 553 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 BBS4Q96RK4 519 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 GALNT8Q9NY28 637 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 ZMYM5Q9UJ78 669 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 SIK3Q9Y2K2 1263 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 OR6A2O95222 327 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 KRT6AP02538 564 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 KRT6BP04259 564 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 CYP2A6P11509 494 aaPredicted RBP18.98■□□□□ 0.63
VARS2-209ENST00000477288 KRT6CP48668 564 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 ZNF720Q7Z2F6 126 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 PIH1D1Q9NWS0 290 aaKnown RBP18.98■□□□□ 0.63
VARS2-209ENST00000477288 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
VARS2-209ENST00000477288 C3orf67Q6ZVT6 689 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 GLT6D1Q7Z4J2 308 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 IZUMO1Q8IYV9 350 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 CACTIN-AS1Q8N1I8 211 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 IL25Q9H293 177 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 OR56A5P0C7T3 313 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 KPNB1Q14974 876 aaKnown RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 ZSWIM7Q19AV6 140 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 ADAM32Q8TC27 787 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 PDGFDQ9GZP0 370 aaPredicted RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 H3BN98 237 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 RAD51BO15315 384 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 PROSCO94903 275 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 PABPC1P11940 636 aaKnown RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 CNTFP26441 200 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 ELMO3Q96BJ8 720 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 NMD3Q96D46 503 aaKnown RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 MTFMTQ96DP5 389 aaKnown RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 C6orf62Q9GZU0 229 aaPredicted RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 GANQ9H2C0 597 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 KIAA1210Q9ULL0 1709 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 NCAM2O15394 837 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 ARMC4Q5T2S8 1044 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 PDZK1Q5T2W1 519 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 HIC2Q96JB3 615 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 MRPL9Q9BYD2 267 aaKnown RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 HMX1Q9NP08 348 aaPredicted RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 JAK1P23458 1154 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 OTUD3Q5T2D3 398 aaPredicted RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 TRAPPC12Q8WVT3 735 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 RNF208Q9H0X6 261 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 CXorf56Q9H5V9 222 aa18.97■□□□□ 0.63
VARS2-209ENST00000477288 UXTQ9UBK9 157 aaPredicted RBP18.97■□□□□ 0.63
VARS2-209ENST00000477288 TMEM191CA6NGB0 347 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 LRRC14BA6NHZ5 514 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 SEC22BO75396 215 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 MICAL2O94851 1124 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 PAICSP22234 425 aaKnown RBP18.96■□□□□ 0.63
VARS2-209ENST00000477288 SLC27A1Q6PCB7 646 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 TPGS1Q6ZTW0 290 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 FNDC5Q8NAU1 212 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 RTFDC1Q9BY42 306 aaPredicted RBP18.96■□□□□ 0.63
VARS2-209ENST00000477288 RHBGQ9H310 441 aa18.96■□□□□ 0.63
VARS2-209ENST00000477288 ZNF7P17097 686 aaPredicted RBP18.96■□□□□ 0.63
VARS2-209ENST00000477288 SLC25A24Q6NUK1 477 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms