RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 RFPL1O75677 317 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 ITGB1P05556 798 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 PYGBP11216 843 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 ERCC2P18074 760 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 PAX3P23760 479 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 HNRNPH1P31943 449 aaKnown RBP11.84□□□□□ -0.51
NUP188-205ENST00000477069 PARP6Q2NL67 630 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 FAM133BQ5BKY9 247 aaKnown RBP11.84□□□□□ -0.51
NUP188-205ENST00000477069 OTOAQ7RTW8 1153 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 LRRTM3Q86VH5 581 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 PDCD7Q8N8D1 485 aaKnown RBP11.84□□□□□ -0.51
NUP188-205ENST00000477069 C10orf82Q8WW14 230 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 ARNTL2Q8WYA1 636 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 RSPH1Q8WYR4 309 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 DPF3Q92784 378 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 UROC1Q96N76 676 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 TMEM209Q96SK2 561 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 ADAM2Q99965 735 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 TRMT13Q9NUP7 481 aaKnown RBP11.84□□□□□ -0.51
NUP188-205ENST00000477069 DSEQ9UL01 958 aa11.84□□□□□ -0.51
NUP188-205ENST00000477069 H0YHG0 523 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 B3GAT3O94766 335 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.51
NUP188-205ENST00000477069 PSMB4P28070 264 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 NCALDP61601 193 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 PPIDQ08752 370 aaKnown RBP11.83□□□□□ -0.51
NUP188-205ENST00000477069 PAN2Q504Q3 1202 aaKnown RBP11.83□□□□□ -0.51
NUP188-205ENST00000477069 TRAF7Q6Q0C0 670 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 BEND5Q7L4P6 421 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 APBB2Q92870 758 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 PTPRN2Q92932 1015 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 PGBD4Q96DM1 585 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 HHIPL1Q96JK4 782 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 DDIT4Q9NX09 232 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 KLHL14Q9P2G3 628 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 NEU3Q9UQ49 428 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 SQORQ9Y6N5 450 aa11.83□□□□□ -0.51
NUP188-205ENST00000477069 TRIM49D1C9J1S8 452 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 ZNF189O75820 626 aaPredicted RBP11.83□□□□□ -0.52
NUP188-205ENST00000477069 F9P00740 461 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 SNRPAP09012 282 aaKnown RBP11.83□□□□□ -0.52
NUP188-205ENST00000477069 BDNFP23560 247 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 NIPAL4Q0D2K0 466 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 ARTNQ5T4W7 220 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 CDHR3Q6ZTQ4 885 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 TAC4Q86UU9 113 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 STAMBPL1Q96FJ0 436 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 SUSD3Q96L08 255 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 CEP41Q9BYV8 373 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 F8W810 466 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 KRT37O76014 449 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 STK10O94804 968 aaKnown RBP11.83□□□□□ -0.52
NUP188-205ENST00000477069 PTPN3P26045 913 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 ZNF135P52742 658 aaPredicted RBP11.83□□□□□ -0.52
NUP188-205ENST00000477069 TPI1P60174 286 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 SARNPP82979 210 aaKnown RBP11.83□□□□□ -0.52
NUP188-205ENST00000477069 MAP3K21Q5TCX8 1036 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 METTL23Q86XA0 190 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 CTAGE3PQ8IX95 158 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 HASPINQ8TF76 798 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 EDEM1Q92611 657 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 HDAC11Q96DB2 347 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 DMAP1Q9NPF5 467 aaPredicted RBP11.83□□□□□ -0.52
NUP188-205ENST00000477069 MAD1L1Q9Y6D9 718 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 CEP350Q5VT06 3117 aa11.83□□□□□ -0.52
NUP188-205ENST00000477069 SHROOM3Q8TF72 1996 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 MYO18AQ92614 2054 aaKnown RBP11.82□□□□□ -0.52
NUP188-205ENST00000477069 WDR27A2RRH5 827 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 B4GALT3O60512 393 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 IL1BP01584 269 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 SKIP12755 728 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 ELNP15502 786 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 GALNT2Q10471 571 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 ITGA7Q13683 1181 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 BSPRYQ5W0U4 402 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 MARK2Q7KZI7 788 aaKnown RBP11.82□□□□□ -0.52
NUP188-205ENST00000477069 MTBPQ96DY7 904 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 RNF186Q9NXI6 227 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 NYNRINQ9P2P1 1898 aaKnown RBP11.82□□□□□ -0.52
NUP188-205ENST00000477069 SDR42E2A6NKP2 422 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 F5H423 210 aaPredicted RBP11.82□□□□□ -0.52
NUP188-205ENST00000477069 NCAM2O15394 837 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 CCNB1P14635 433 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 TYMPP19971 482 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 ARL13BQ3SXY8 428 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 DCLRE1AQ6PJP8 1040 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 TIFABQ6ZNK6 161 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 ASRGL1Q7L266 308 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 PCSK9Q8NBP7 692 aaKnown RBP11.82□□□□□ -0.52
NUP188-205ENST00000477069 ZSCAN18Q8TBC5 510 aaPredicted RBP11.82□□□□□ -0.52
NUP188-205ENST00000477069 DQX1Q8TE96 717 aaKnown RBP11.82□□□□□ -0.52
NUP188-205ENST00000477069 TTC17Q96AE7 1141 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 FAM111AQ96PZ2 611 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 SRPK1Q96SB4 655 aaKnown RBP11.82□□□□□ -0.52
NUP188-205ENST00000477069 TKTL2Q9H0I9 626 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 RGS18Q9NS28 235 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 CHKBQ9Y259 395 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 SNX10Q9Y5X0 201 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 USH1CQ9Y6N9 552 aa11.82□□□□□ -0.52
NUP188-205ENST00000477069 VWA8A3KMH1 1905 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms